Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
MSI1O43347 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MSI1O43347 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MSI1O43347 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MSI1O43347 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MSI1O43347 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MSI1O43347 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MSI1O43347 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
MSI1O43347 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
MSI1O43347 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.91■□□□□ 0.94
MSI1O43347 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MSI1O43347 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MSI1O43347 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
MSI1O43347 AL157384.1-201ENST00000445995 2473 ntBASIC20.91■□□□□ 0.94
MSI1O43347 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
MSI1O43347 SLC25A24-204ENST00000569674 2357 ntBASIC20.91■□□□□ 0.94
MSI1O43347 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.91■□□□□ 0.94
MSI1O43347 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
MSI1O43347 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
MSI1O43347 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
MSI1O43347 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
MSI1O43347 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MSI1O43347 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
MSI1O43347 AC092667.1-201ENST00000434301 2586 ntBASIC20.91■□□□□ 0.94
MSI1O43347 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.9■□□□□ 0.94
MSI1O43347 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSI1O43347 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSI1O43347 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSI1O43347 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.9■□□□□ 0.94
MSI1O43347 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSI1O43347 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
MSI1O43347 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.9■□□□□ 0.94
MSI1O43347 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSI1O43347 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.9■□□□□ 0.94
MSI1O43347 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.9■□□□□ 0.94
MSI1O43347 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
MSI1O43347 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSI1O43347 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.9■□□□□ 0.94
MSI1O43347 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.9■□□□□ 0.94
MSI1O43347 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.9■□□□□ 0.94
MSI1O43347 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.9■□□□□ 0.94
MSI1O43347 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
MSI1O43347 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
MSI1O43347 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSI1O43347 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MSI1O43347 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSI1O43347 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MSI1O43347 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MSI1O43347 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
MSI1O43347 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.89■□□□□ 0.94
MSI1O43347 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
MSI1O43347 FEM1AP1-201ENST00000431297 1995 ntBASIC20.89■□□□□ 0.93
MSI1O43347 AC020907.5-201ENST00000624372 1936 ntBASIC20.89■□□□□ 0.93
MSI1O43347 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MSI1O43347 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MSI1O43347 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSI1O43347 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSI1O43347 AL390719.1-204ENST00000412397 1219 ntBASIC20.89■□□□□ 0.93
MSI1O43347 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
MSI1O43347 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSI1O43347 AC233263.1-201ENST00000578059 224 ntBASIC20.89■□□□□ 0.93
MSI1O43347 ITM2C-210ENST00000620962 501 ntBASIC20.89■□□□□ 0.93
MSI1O43347 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSI1O43347 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.89■□□□□ 0.93
MSI1O43347 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
MSI1O43347 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSI1O43347 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.89■□□□□ 0.93
MSI1O43347 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSI1O43347 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.89■□□□□ 0.93
MSI1O43347 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSI1O43347 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MSI1O43347 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.88■□□□□ 0.93
MSI1O43347 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MSI1O43347 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.88■□□□□ 0.93
MSI1O43347 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MSI1O43347 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MSI1O43347 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MSI1O43347 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MSI1O43347 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MSI1O43347 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.88■□□□□ 0.93
MSI1O43347 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.88■□□□□ 0.93
MSI1O43347 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MSI1O43347 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MSI1O43347 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MSI1O43347 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.88■□□□□ 0.93
MSI1O43347 KRT18P29-201ENST00000397031 1267 ntBASIC20.88■□□□□ 0.93
MSI1O43347 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
MSI1O43347 AC128676.1-201ENST00000454392 318 ntBASIC20.88■□□□□ 0.93
MSI1O43347 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.88■□□□□ 0.93
MSI1O43347 AC023632.3-201ENST00000521633 145 ntBASIC20.88■□□□□ 0.93
MSI1O43347 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
MSI1O43347 AC008687.6-201ENST00000596318 630 ntBASIC20.88■□□□□ 0.93
MSI1O43347 TMEM191A-211ENST00000637163 1067 ntBASIC20.88■□□□□ 0.93
MSI1O43347 AC073648.6-201ENST00000641589 218 ntBASIC20.88■□□□□ 0.93
MSI1O43347 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MSI1O43347 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.88■□□□□ 0.93
MSI1O43347 AP005212.1-201ENST00000581547 1997 ntBASIC20.88■□□□□ 0.93
MSI1O43347 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.87■□□□□ 0.93
MSI1O43347 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MSI1O43347 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms