Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN4O14493 AC023632.3-201ENST00000521633 145 ntBASIC18.94■□□□□ 0.62
CLDN4O14493 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.94■□□□□ 0.62
CLDN4O14493 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN4O14493 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.94■□□□□ 0.62
CLDN4O14493 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CLDN4O14493 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN4O14493 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.94■□□□□ 0.62
CLDN4O14493 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN4O14493 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN4O14493 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN4O14493 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLDN4O14493 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN4O14493 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN4O14493 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN4O14493 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CLDN4O14493 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN4O14493 AC092368.3-202ENST00000574180 1591 ntBASIC18.93■□□□□ 0.62
CLDN4O14493 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN4O14493 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN4O14493 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN4O14493 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN4O14493 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN4O14493 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN4O14493 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN4O14493 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CLDN4O14493 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN4O14493 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN4O14493 HLA-G-202ENST00000376815 851 ntBASIC18.93■□□□□ 0.62
CLDN4O14493 HLA-G-203ENST00000376818 1127 ntBASIC18.93■□□□□ 0.62
CLDN4O14493 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.93■□□□□ 0.62
CLDN4O14493 RNA5SP413-201ENST00000516373 109 ntBASIC18.93■□□□□ 0.62
CLDN4O14493 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLDN4O14493 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN4O14493 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN4O14493 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN4O14493 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CLDN4O14493 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.93■□□□□ 0.62
CLDN4O14493 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN4O14493 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN4O14493 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLDN4O14493 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN4O14493 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN4O14493 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CLDN4O14493 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CLDN4O14493 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLDN4O14493 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CLDN4O14493 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN4O14493 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN4O14493 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN4O14493 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN4O14493 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN4O14493 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN4O14493 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLDN4O14493 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.92■□□□□ 0.62
CLDN4O14493 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN4O14493 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN4O14493 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.92■□□□□ 0.62
CLDN4O14493 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.92■□□□□ 0.62
CLDN4O14493 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN4O14493 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN4O14493 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN4O14493 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN4O14493 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN4O14493 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN4O14493 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN4O14493 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN4O14493 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN4O14493 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CLDN4O14493 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLDN4O14493 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
CLDN4O14493 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN4O14493 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN4O14493 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLDN4O14493 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN4O14493 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN4O14493 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN4O14493 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN4O14493 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN4O14493 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.91■□□□□ 0.62
CLDN4O14493 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN4O14493 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN4O14493 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN4O14493 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLDN4O14493 AC073314.1-201ENST00000568729 2216 ntBASIC18.91■□□□□ 0.62
CLDN4O14493 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN4O14493 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN4O14493 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN4O14493 CD99P1-205ENST00000527459 561 ntBASIC18.91■□□□□ 0.62
CLDN4O14493 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN4O14493 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.91■□□□□ 0.62
CLDN4O14493 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN4O14493 AP005212.1-201ENST00000581547 1997 ntBASIC18.91■□□□□ 0.62
CLDN4O14493 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN4O14493 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN4O14493 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN4O14493 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN4O14493 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.91■□□□□ 0.62
CLDN4O14493 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN4O14493 KRT8P20-201ENST00000423953 1409 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms