Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA4O00483 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA4O00483 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.46■□□□□ 0.07
NDUFA4O00483 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NDUFA4O00483 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NDUFA4O00483 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.06
NDUFA4O00483 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
NDUFA4O00483 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NDUFA4O00483 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.45■□□□□ 0.06
NDUFA4O00483 SLC29A4P1-201ENST00000398760 971 ntBASIC15.45■□□□□ 0.06
NDUFA4O00483 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.45■□□□□ 0.06
NDUFA4O00483 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.45■□□□□ 0.06
NDUFA4O00483 C2orf69P4-201ENST00000565394 541 ntBASIC15.45■□□□□ 0.06
NDUFA4O00483 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
NDUFA4O00483 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA4O00483 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
NDUFA4O00483 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.45■□□□□ 0.06
NDUFA4O00483 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA4O00483 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
NDUFA4O00483 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA4O00483 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA4O00483 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA4O00483 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA4O00483 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA4O00483 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
NDUFA4O00483 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA4O00483 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NDUFA4O00483 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA4O00483 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA4O00483 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA4O00483 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.44■□□□□ 0.06
NDUFA4O00483 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.44■□□□□ 0.06
NDUFA4O00483 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.44■□□□□ 0.06
NDUFA4O00483 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
NDUFA4O00483 GPX1P1-201ENST00000388829 606 ntBASIC15.44■□□□□ 0.06
NDUFA4O00483 BX276092.2-201ENST00000417668 665 ntBASIC15.44■□□□□ 0.06
NDUFA4O00483 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.44■□□□□ 0.06
NDUFA4O00483 NCF1B-203ENST00000435988 1254 ntBASIC15.44■□□□□ 0.06
NDUFA4O00483 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.44■□□□□ 0.06
NDUFA4O00483 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.44■□□□□ 0.06
NDUFA4O00483 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NDUFA4O00483 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.44■□□□□ 0.06
NDUFA4O00483 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.44■□□□□ 0.06
NDUFA4O00483 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.44■□□□□ 0.06
NDUFA4O00483 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.44■□□□□ 0.06
NDUFA4O00483 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA4O00483 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.44■□□□□ 0.06
NDUFA4O00483 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA4O00483 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
NDUFA4O00483 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA4O00483 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA4O00483 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA4O00483 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NDUFA4O00483 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA4O00483 AC099778.1-201ENST00000568593 1911 ntBASIC15.43■□□□□ 0.06
NDUFA4O00483 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.43■□□□□ 0.06
NDUFA4O00483 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.43■□□□□ 0.06
NDUFA4O00483 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA4O00483 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.43■□□□□ 0.06
NDUFA4O00483 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NDUFA4O00483 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.43■□□□□ 0.06
NDUFA4O00483 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.43■□□□□ 0.06
NDUFA4O00483 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA4O00483 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA4O00483 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA4O00483 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA4O00483 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA4O00483 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NDUFA4O00483 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NDUFA4O00483 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.42■□□□□ 0.06
NDUFA4O00483 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NDUFA4O00483 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA4O00483 HLA-G-202ENST00000376815 851 ntBASIC15.42■□□□□ 0.06
NDUFA4O00483 HLA-G-203ENST00000376818 1127 ntBASIC15.42■□□□□ 0.06
NDUFA4O00483 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NDUFA4O00483 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.42■□□□□ 0.06
NDUFA4O00483 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms