Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK1AO00322 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK1AO00322 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.09■□□□□ 0.65
UPK1AO00322 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.09■□□□□ 0.65
UPK1AO00322 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.09■□□□□ 0.65
UPK1AO00322 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UPK1AO00322 AC016405.3-201ENST00000607710 860 ntBASIC19.09■□□□□ 0.65
UPK1AO00322 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.09■□□□□ 0.65
UPK1AO00322 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.09■□□□□ 0.65
UPK1AO00322 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
UPK1AO00322 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.09■□□□□ 0.65
UPK1AO00322 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UPK1AO00322 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.09■□□□□ 0.65
UPK1AO00322 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UPK1AO00322 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.09■□□□□ 0.65
UPK1AO00322 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
UPK1AO00322 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
UPK1AO00322 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.08■□□□□ 0.65
UPK1AO00322 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
UPK1AO00322 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.08■□□□□ 0.65
UPK1AO00322 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UPK1AO00322 AL158211.5-201ENST00000623583 2518 ntBASIC19.08■□□□□ 0.65
UPK1AO00322 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPK1AO00322 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPK1AO00322 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UPK1AO00322 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPK1AO00322 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPK1AO00322 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPK1AO00322 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UPK1AO00322 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
UPK1AO00322 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK1AO00322 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK1AO00322 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK1AO00322 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UPK1AO00322 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.08■□□□□ 0.64
UPK1AO00322 IKBKGP1-201ENST00000612193 1073 ntBASIC19.08■□□□□ 0.64
UPK1AO00322 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
UPK1AO00322 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.08■□□□□ 0.64
UPK1AO00322 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UPK1AO00322 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UPK1AO00322 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK1AO00322 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.08■□□□□ 0.64
UPK1AO00322 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
UPK1AO00322 AC068338.2-201ENST00000563278 1430 ntBASIC19.08■□□□□ 0.64
UPK1AO00322 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
UPK1AO00322 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UPK1AO00322 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.08■□□□□ 0.64
UPK1AO00322 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1AO00322 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1AO00322 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1AO00322 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
UPK1AO00322 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1AO00322 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.07■□□□□ 0.64
UPK1AO00322 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1AO00322 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1AO00322 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.07■□□□□ 0.64
UPK1AO00322 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1AO00322 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1AO00322 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
UPK1AO00322 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.07■□□□□ 0.64
UPK1AO00322 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1AO00322 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.07■□□□□ 0.64
UPK1AO00322 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
UPK1AO00322 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1AO00322 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
UPK1AO00322 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.07■□□□□ 0.64
UPK1AO00322 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.07■□□□□ 0.64
UPK1AO00322 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.07■□□□□ 0.64
UPK1AO00322 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UPK1AO00322 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1AO00322 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.06■□□□□ 0.64
UPK1AO00322 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1AO00322 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1AO00322 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1AO00322 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.06■□□□□ 0.64
UPK1AO00322 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1AO00322 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.06■□□□□ 0.64
UPK1AO00322 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.06■□□□□ 0.64
UPK1AO00322 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1AO00322 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1AO00322 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UPK1AO00322 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
UPK1AO00322 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
UPK1AO00322 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1AO00322 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1AO00322 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1AO00322 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1AO00322 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1AO00322 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1AO00322 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1AO00322 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.05■□□□□ 0.64
UPK1AO00322 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1AO00322 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UPK1AO00322 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.05■□□□□ 0.64
UPK1AO00322 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.05■□□□□ 0.64
UPK1AO00322 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.05■□□□□ 0.64
UPK1AO00322 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.05■□□□□ 0.64
UPK1AO00322 AC231657.2-201ENST00000624556 255 ntBASIC19.05■□□□□ 0.64
UPK1AO00322 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.05■□□□□ 0.64
UPK1AO00322 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms