Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.14■□□□□ 0.81
TRIM49D1C9J1S8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.14■□□□□ 0.81
TRIM49D1C9J1S8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49D1C9J1S8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.14■□□□□ 0.81
TRIM49D1C9J1S8 AL020996.1-203ENST00000536896 2307 ntBASIC20.14■□□□□ 0.81
TRIM49D1C9J1S8 AC098818.2-201ENST00000564925 2320 ntBASIC20.14■□□□□ 0.81
TRIM49D1C9J1S8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49D1C9J1S8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49D1C9J1S8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49D1C9J1S8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM49D1C9J1S8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 BX323043.1-201ENST00000641006 1765 ntBASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM49D1C9J1S8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 TERF1P2-201ENST00000583350 1212 ntBASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM49D1C9J1S8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 SLC7A5P1-201ENST00000568957 537 ntBASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms