Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HMX3A6NHT5 AC099791.2-201ENST00000605725 427 ntBASIC17.41■□□□□ 0.38
HMX3A6NHT5 AC241377.3-202ENST00000626088 1088 ntBASIC17.41■□□□□ 0.38
HMX3A6NHT5 AC241585.3-202ENST00000628937 1088 ntBASIC17.41■□□□□ 0.38
HMX3A6NHT5 AC245100.8-202ENST00000629247 1058 ntBASIC17.41■□□□□ 0.38
HMX3A6NHT5 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMX3A6NHT5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMX3A6NHT5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
HMX3A6NHT5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMX3A6NHT5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
HMX3A6NHT5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.41■□□□□ 0.38
HMX3A6NHT5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.41■□□□□ 0.38
HMX3A6NHT5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HMX3A6NHT5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.41■□□□□ 0.38
HMX3A6NHT5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMX3A6NHT5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMX3A6NHT5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMX3A6NHT5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMX3A6NHT5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.4■□□□□ 0.38
HMX3A6NHT5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HMX3A6NHT5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMX3A6NHT5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HMX3A6NHT5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMX3A6NHT5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMX3A6NHT5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.4■□□□□ 0.38
HMX3A6NHT5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HMX3A6NHT5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMX3A6NHT5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HMX3A6NHT5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.4■□□□□ 0.38
HMX3A6NHT5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.4■□□□□ 0.38
HMX3A6NHT5 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.4■□□□□ 0.38
HMX3A6NHT5 AL499627.2-201ENST00000606283 725 ntBASIC17.4■□□□□ 0.38
HMX3A6NHT5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMX3A6NHT5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.4■□□□□ 0.38
HMX3A6NHT5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMX3A6NHT5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMX3A6NHT5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
HMX3A6NHT5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.4■□□□□ 0.38
HMX3A6NHT5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMX3A6NHT5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMX3A6NHT5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMX3A6NHT5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.4■□□□□ 0.38
HMX3A6NHT5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMX3A6NHT5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.39■□□□□ 0.38
HMX3A6NHT5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMX3A6NHT5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.38
HMX3A6NHT5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMX3A6NHT5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMX3A6NHT5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HMX3A6NHT5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HMX3A6NHT5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMX3A6NHT5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMX3A6NHT5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMX3A6NHT5 AC003102.1-202ENST00000563394 1796 ntBASIC17.39■□□□□ 0.37
HMX3A6NHT5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.39■□□□□ 0.37
HMX3A6NHT5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.39■□□□□ 0.37
HMX3A6NHT5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.39■□□□□ 0.37
HMX3A6NHT5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.39■□□□□ 0.37
HMX3A6NHT5 pRNA.6-201ENST00000610482 90 ntBASIC17.39■□□□□ 0.37
HMX3A6NHT5 pRNA.5-201ENST00000612139 90 ntBASIC17.39■□□□□ 0.37
HMX3A6NHT5 pRNA.11-201ENST00000618423 90 ntBASIC17.39■□□□□ 0.37
HMX3A6NHT5 pRNA.13-201ENST00000619112 90 ntBASIC17.39■□□□□ 0.37
HMX3A6NHT5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMX3A6NHT5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMX3A6NHT5 AC018470.1-201ENST00000624790 3129 ntBASIC17.39■□□□□ 0.37
HMX3A6NHT5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMX3A6NHT5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
HMX3A6NHT5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMX3A6NHT5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMX3A6NHT5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HMX3A6NHT5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.39■□□□□ 0.37
HMX3A6NHT5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMX3A6NHT5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMX3A6NHT5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HMX3A6NHT5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HMX3A6NHT5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMX3A6NHT5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMX3A6NHT5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMX3A6NHT5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMX3A6NHT5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HMX3A6NHT5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.38■□□□□ 0.37
HMX3A6NHT5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMX3A6NHT5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.38■□□□□ 0.37
HMX3A6NHT5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMX3A6NHT5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMX3A6NHT5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMX3A6NHT5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.38■□□□□ 0.37
HMX3A6NHT5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMX3A6NHT5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMX3A6NHT5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HMX3A6NHT5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMX3A6NHT5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.38■□□□□ 0.37
HMX3A6NHT5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMX3A6NHT5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.38■□□□□ 0.37
HMX3A6NHT5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMX3A6NHT5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMX3A6NHT5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMX3A6NHT5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMX3A6NHT5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.38■□□□□ 0.37
HMX3A6NHT5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms