Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 AC133561.4-201ENST00000566112 224 ntBASIC14.23□□□□□ -0.13
LINC01546A6NGU7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01546A6NGU7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 NOC2LP2-201ENST00000407594 1944 ntBASIC14.22□□□□□ -0.13
LINC01546A6NGU7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 AC116050.2-201ENST00000612102 1779 ntBASIC14.22□□□□□ -0.13
LINC01546A6NGU7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01546A6NGU7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 AC005332.8-201ENST00000622750 2735 ntBASIC14.21□□□□□ -0.13
LINC01546A6NGU7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 AC136469.2-201ENST00000623944 1028 ntBASIC14.21□□□□□ -0.13
LINC01546A6NGU7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LINC01546A6NGU7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
LINC01546A6NGU7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC01546A6NGU7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC01546A6NGU7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
LINC01546A6NGU7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC01546A6NGU7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms