Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.85■□□□□ 0.61
TCRBV3S1A0A5B6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV3S1A0A5B6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 KRT16P2-201ENST00000414673 1423 ntBASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 AC005082.1-201ENST00000413042 2259 ntBASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 AL032819.2-201ENST00000624543 2162 ntBASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 MIR4767-201ENST00000582827 78 ntBASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 LINC01465-201ENST00000408887 1940 ntBASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV3S1A0A5B6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TCRBV3S1A0A5B6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TCRBV3S1A0A5B6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
TCRBV3S1A0A5B6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.83■□□□□ 0.61
TCRBV3S1A0A5B6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV3S1A0A5B6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV3S1A0A5B6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV3S1A0A5B6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.83■□□□□ 0.6
TCRBV3S1A0A5B6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV3S1A0A5B6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV3S1A0A5B6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV3S1A0A5B6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV3S1A0A5B6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV3S1A0A5B6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 GUSBP5-201ENST00000418136 578 ntBASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV3S1A0A5B6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 AC009237.14-201ENST00000609975 1594 ntBASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV3S1A0A5B6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV3S1A0A5B6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms