Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TCRBV5S1A1TA0A578 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.06■□□□□ 0.96
TCRBV5S1A1TA0A578 MIPEPP3-201ENST00000412105 444 ntBASIC21.06■□□□□ 0.96
TCRBV5S1A1TA0A578 BX276092.2-201ENST00000417668 665 ntBASIC21.06■□□□□ 0.96
TCRBV5S1A1TA0A578 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.06■□□□□ 0.96
TCRBV5S1A1TA0A578 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TCRBV5S1A1TA0A578 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.06■□□□□ 0.96
TCRBV5S1A1TA0A578 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TCRBV5S1A1TA0A578 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TCRBV5S1A1TA0A578 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TCRBV5S1A1TA0A578 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 GPX1P1-201ENST00000388829 606 ntBASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 AC006970.2-201ENST00000450065 779 ntBASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TCRBV5S1A1TA0A578 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 LSM12P1-201ENST00000411836 588 ntBASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 TSPY6P-201ENST00000448518 926 ntBASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TCRBV5S1A1TA0A578 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.03■□□□□ 0.96
TCRBV5S1A1TA0A578 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TCRBV5S1A1TA0A578 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
TCRBV5S1A1TA0A578 AC023632.3-201ENST00000521633 145 ntBASIC21.03■□□□□ 0.96
TCRBV5S1A1TA0A578 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
TCRBV5S1A1TA0A578 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.03■□□□□ 0.96
TCRBV5S1A1TA0A578 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TCRBV5S1A1TA0A578 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.03■□□□□ 0.96
TCRBV5S1A1TA0A578 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TCRBV5S1A1TA0A578 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TCRBV5S1A1TA0A578 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.03■□□□□ 0.96
TCRBV5S1A1TA0A578 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.03■□□□□ 0.96
TCRBV5S1A1TA0A578 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TCRBV5S1A1TA0A578 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TCRBV5S1A1TA0A578 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.02■□□□□ 0.96
TCRBV5S1A1TA0A578 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TCRBV5S1A1TA0A578 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.02■□□□□ 0.96
TCRBV5S1A1TA0A578 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.02■□□□□ 0.96
TCRBV5S1A1TA0A578 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TCRBV5S1A1TA0A578 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.02■□□□□ 0.96
TCRBV5S1A1TA0A578 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.02■□□□□ 0.96
TCRBV5S1A1TA0A578 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TCRBV5S1A1TA0A578 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TCRBV5S1A1TA0A578 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TCRBV5S1A1TA0A578 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TCRBV5S1A1TA0A578 KRT8P20-201ENST00000423953 1409 ntBASIC21.02■□□□□ 0.96
TCRBV5S1A1TA0A578 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 TMEM179-206ENST00000616017 1645 ntBASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 AC092118.2-201ENST00000613495 667 ntBASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.01■□□□□ 0.95
TCRBV5S1A1TA0A578 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms