Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 AF186192.3-201ENST00000583427 947 ntBASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV17A0A0B4J275 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 FAM210CP-201ENST00000445714 574 ntBASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV17A0A0B4J275 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV17A0A0B4J275 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
TRAV17A0A0B4J275 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 AL355355.2-201ENST00000442321 338 ntBASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 AC026471.5-201ENST00000615068 467 ntBASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV17A0A0B4J275 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 KRT8P20-201ENST00000423953 1409 ntBASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 AL031963.3-201ENST00000606441 850 ntBASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV17A0A0B4J275 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV17A0A0B4J275 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms