Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 AL356441.2-201ENST00000443009 864 ntBASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 AC138907.5-202ENST00000569484 235 ntBASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV1-2A0A0B4J238 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 AC024257.2-201ENST00000549699 147 ntBASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 AC008764.7-201ENST00000593779 1081 ntBASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV1-2A0A0B4J238 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 AC099791.1-201ENST00000416440 715 ntBASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 AC009237.14-201ENST00000609975 1594 ntBASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV1-2A0A0B4J238 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 KRT87P-202ENST00000534226 1464 ntBASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 AC012414.1-201ENST00000556676 535 ntBASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 TPRG1LP1-201ENST00000598702 760 ntBASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAV1-2A0A0B4J238 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms