Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DUX4L2-201ENST00000561772 1275 ntBASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 NTF6G-201ENST00000591094 616 ntBASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DUX4L6-201ENST00000626483 1275 ntBASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DUX4L1-201ENST00000627662 1275 ntBASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DUX4L8-201ENST00000629013 1275 ntBASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DUX4L3-201ENST00000630187 1275 ntBASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DUX4L7-201ENST00000630678 1275 ntBASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DUX4L5-201ENST00000630834 1275 ntBASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AC007225.1-201ENST00000566331 1836 ntBASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AC121338.2-201ENST00000622535 1744 ntBASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AL512408.1-201ENST00000569378 2000 ntBASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 POU5F1P4-201ENST00000413175 1085 ntBASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 EEF1DP3-203ENST00000566025 782 ntBASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms