Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 AC091799.1-201ENST00000422823 811 ntBASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 KRT8P36-201ENST00000489121 1440 ntBASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 SLC7A5P1-201ENST00000568957 537 ntBASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 RBM17P2-201ENST00000616397 1405 ntBASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV6-7A0A0A0MS04 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-7A0A0A0MS04 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-7A0A0A0MS04 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-7A0A0A0MS04 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-7A0A0A0MS04 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRBV6-7A0A0A0MS04 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
TRBV6-7A0A0A0MS04 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRBV6-7A0A0A0MS04 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-7A0A0A0MS04 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-7A0A0A0MS04 AC007322.3-201ENST00000426526 701 ntBASIC16.81■□□□□ 0.28
TRBV6-7A0A0A0MS04 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TRBV6-7A0A0A0MS04 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
TRBV6-7A0A0A0MS04 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-7A0A0A0MS04 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-7A0A0A0MS04 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.81■□□□□ 0.28
TRBV6-7A0A0A0MS04 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 YBX1P1-201ENST00000445822 960 ntBASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-7A0A0A0MS04 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TRBV6-7A0A0A0MS04 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-7A0A0A0MS04 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms