Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 AL590763.1-201ENST00000398297 1545 ntBASIC10.53□□□□□ -0.72
PSEN1P49768 MRPL11-203ENST00000430466 1527 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PSEN1P49768 CALCOCO2-215ENST00000509507 1512 ntTSL 2 BASIC10.53□□□□□ -0.72
PSEN1P49768 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
PSEN1P49768 MPHOSPH8-201ENST00000361479 4235 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
PSEN1P49768 SNX19P1-201ENST00000444901 2981 ntBASIC10.53□□□□□ -0.72
PSEN1P49768 AC092646.2-201ENST00000431242 2095 ntBASIC10.53□□□□□ -0.72
PSEN1P49768 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
PSEN1P49768 SEMA3E-201ENST00000307792 6476 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
PSEN1P49768 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC10.52□□□□□ -0.72
PSEN1P49768 LINC01662-202ENST00000611876 1559 ntBASIC10.52□□□□□ -0.72
PSEN1P49768 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
PSEN1P49768 ELP3-202ENST00000380353 3078 ntTSL 2 BASIC10.52□□□□□ -0.72
PSEN1P49768 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC10.52□□□□□ -0.72
PSEN1P49768 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC10.52□□□□□ -0.72
PSEN1P49768 CTAGE5-214ENST00000556148 2526 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
PSEN1P49768 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC10.52□□□□□ -0.72
PSEN1P49768 LINC01641-202ENST00000445817 1971 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
PSEN1P49768 SFTPB-201ENST00000393822 3666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
PSEN1P49768 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 GSTCD-211ENST00000515279 4273 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
PSEN1P49768 MLH1-201ENST00000231790 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 TTPAL-201ENST00000262605 6212 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 SAMMSON-218ENST00000641601 1847 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 C11orf45-201ENST00000310799 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 AC103591.2-201ENST00000265259 766 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 DEFB104A-201ENST00000314265 281 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 DEFB104B-201ENST00000316169 281 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 APOL4-201ENST00000328429 844 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 RNU5F-7P-201ENST00000363696 115 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
PSEN1P49768 ATP5G1-202ENST00000393366 614 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 NXNP1-201ENST00000397383 1051 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 AC087491.1-201ENST00000398554 616 ntTSL 3 BASIC10.52□□□□□ -0.73
PSEN1P49768 CALM2P3-201ENST00000400429 449 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 RN7SKP169-201ENST00000411124 291 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC10.52□□□□□ -0.73
PSEN1P49768 KIRREL1-IT1-201ENST00000419415 587 ntTSL 2 BASIC10.52□□□□□ -0.73
PSEN1P49768 TPI1P1-201ENST00000420977 750 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC10.52□□□□□ -0.73
PSEN1P49768 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC10.52□□□□□ -0.73
PSEN1P49768 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC10.52□□□□□ -0.73
PSEN1P49768 SEPHS1P4-201ENST00000446112 1176 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 EIF4A1P6-201ENST00000448133 1210 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 RBMY3AP-201ENST00000449381 1145 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 RNU7-140P-201ENST00000459546 60 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 SNORD42A-201ENST00000459584 64 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 AC079340.2-202ENST00000504785 448 ntTSL 5 BASIC10.52□□□□□ -0.73
PSEN1P49768 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC10.52□□□□□ -0.73
PSEN1P49768 AC021148.1-203ENST00000507033 982 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 AC114786.3-201ENST00000509304 705 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC10.52□□□□□ -0.73
PSEN1P49768 AC093677.1-201ENST00000514414 678 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 RNU6-264P-201ENST00000517134 104 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 AC084116.1-201ENST00000521428 489 ntTSL 3 BASIC10.52□□□□□ -0.73
PSEN1P49768 MINCR-206ENST00000524335 499 ntTSL 2 BASIC10.52□□□□□ -0.73
PSEN1P49768 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC10.52□□□□□ -0.73
PSEN1P49768 RPEP6-201ENST00000546228 626 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 OR7K1P-201ENST00000546439 926 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 AC093027.1-201ENST00000546698 429 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 CR383656.6-201ENST00000550518 394 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC10.52□□□□□ -0.73
PSEN1P49768 AC009127.2-201ENST00000561979 426 ntTSL 5 BASIC10.52□□□□□ -0.73
PSEN1P49768 AC034268.2-201ENST00000571784 482 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC10.52□□□□□ -0.73
PSEN1P49768 AC090409.1-201ENST00000587754 735 ntTSL 5 BASIC10.52□□□□□ -0.73
PSEN1P49768 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC10.52□□□□□ -0.73
PSEN1P49768 AL442067.1-201ENST00000613261 223 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 AL121890.2-201ENST00000617644 465 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 AC022784.8-201ENST00000623764 559 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 PALB2-201ENST00000261584 4003 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 SLC2A3P4-201ENST00000521259 1471 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC10.52□□□□□ -0.73
PSEN1P49768 AKNAD1-203ENST00000370001 3053 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 ELP3-201ENST00000256398 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
PSEN1P49768 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
PSEN1P49768 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
PSEN1P49768 MROH8-203ENST00000400441 3345 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
PSEN1P49768 MIR4697HG-201ENST00000624667 5164 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 MRAS-210ENST00000614350 4377 ntTSL 2 BASIC10.52□□□□□ -0.73
PSEN1P49768 AC022034.2-201ENST00000426023 2387 ntTSL 2 BASIC10.52□□□□□ -0.73
PSEN1P49768 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC10.52□□□□□ -0.73
PSEN1P49768 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 LINC01133-203ENST00000635112 1996 ntTSL 5 BASIC10.52□□□□□ -0.73
PSEN1P49768 AC069547.1-201ENST00000624562 1586 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 NOLC1-207ENST00000488254 2441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 MTND5P1-201ENST00000445440 1375 ntBASIC10.52□□□□□ -0.73
PSEN1P49768 MYH11-203ENST00000452625 6886 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 PFKFB1-204ENST00000614686 1353 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 LINC02260-201ENST00000508484 2216 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 TWISTNB-201ENST00000222567 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PSEN1P49768 OR9A4-202ENST00000641559 2018 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
PSEN1P49768 CD274-201ENST00000381573 3343 ntTSL 5 BASIC10.51□□□□□ -0.73
PSEN1P49768 ANKRD6-213ENST00000520793 2489 ntTSL 2 BASIC10.51□□□□□ -0.73
PSEN1P49768 RNF185-201ENST00000266252 2946 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PSEN1P49768 STIP1P3-201ENST00000394563 1624 ntBASIC10.51□□□□□ -0.73
PSEN1P49768 MSC-AS1-201ENST00000457356 4220 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PSEN1P49768 ZNF141-205ENST00000512994 1611 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms