Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 RN7SL647P-201ENST00000485429 300 ntBASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 AC108688.1-201ENST00000485817 713 ntBASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 AC026700.1-201ENST00000512074 544 ntBASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 AC108471.2-205ENST00000529314 628 ntTSL 3 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 NPIPP1-203ENST00000547107 1071 ntBASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 AC087286.4-201ENST00000558757 746 ntTSL 3 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 MIR4685-201ENST00000578185 69 ntBASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 MARK3P1-201ENST00000604796 643 ntBASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 MIR6731-201ENST00000614863 72 ntBASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 EIF4BP4-201ENST00000441847 1780 ntBASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 MAPK10-319ENST00000641459 2542 ntBASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPIPA3F8WFD2 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
NPIPA3F8WFD2 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC7.09□□□□□ -1.28
NPIPA3F8WFD2 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
NPIPA3F8WFD2 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
NPIPA3F8WFD2 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
NPIPA3F8WFD2 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
NPIPA3F8WFD2 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 BMS1P12-201ENST00000428213 706 ntBASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 EEF1A1P27-201ENST00000429983 1135 ntBASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 YAP1P2-201ENST00000455104 610 ntBASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 NACAP1-202ENST00000519039 641 ntBASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 CYP4A44P-201ENST00000569984 154 ntBASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 AC129492.5-201ENST00000603489 315 ntBASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 AC116003.3-201ENST00000612669 541 ntBASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 AC016582.3-206ENST00000636547 207 ntBASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 AL139805.2-201ENST00000455305 2433 ntBASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NPIPA3F8WFD2 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPIPA3F8WFD2 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NPIPA3F8WFD2 THAP12P6-201ENST00000431978 2310 ntBASIC7.07□□□□□ -1.28
NPIPA3F8WFD2 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPIPA3F8WFD2 SMG1P1-202ENST00000309865 4223 ntBASIC7.07□□□□□ -1.28
NPIPA3F8WFD2 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPIPA3F8WFD2 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NPIPA3F8WFD2 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms