Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 OR7E15P-201ENST00000533484 967 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 MELK-208ENST00000536987 2125 ntTSL 2 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AC233290.2-201ENST00000552852 390 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 MT1L-202ENST00000566367 78 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AC006238.1-201ENST00000609787 534 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AL132821.1-201ENST00000616029 394 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 SLC20A1P2-201ENST00000618036 966 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 AC092111.1-201ENST00000618256 3358 ntBASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 TCTN1-201ENST00000377654 1539 ntTSL 5 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 SEPT4-216ENST00000580844 1396 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 GLRX-201ENST00000237858 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 SNORA55-201ENST00000364587 135 ntBASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 SMARCA2-205ENST00000382183 1178 ntTSL 5 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 AL035698.1-201ENST00000405812 564 ntBASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 AL049758.1-201ENST00000423154 397 ntBASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 PSMA2-204ENST00000445517 683 ntTSL 2 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 AC005840.2-201ENST00000447193 355 ntBASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 RN7SL333P-201ENST00000476398 297 ntBASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 AC007346.1-202ENST00000602826 684 ntBASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 VDAC1P5-201ENST00000603132 844 ntBASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 HNRNPA1P67-201ENST00000604027 926 ntBASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 AF146191.1-201ENST00000604941 889 ntBASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 RBM22P6-201ENST00000611682 867 ntBASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 AL606760.4-201ENST00000617613 718 ntBASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 AC005786.4-201ENST00000623369 682 ntBASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 AC007221.2-201ENST00000634367 948 ntTSL 5 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.13□□□□□ -1.27
CCNB1IP1Q9NPC3 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 XRCC6P3-201ENST00000422187 1621 ntBASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 ANKRD55-202ENST00000434982 1518 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 GLYATL2-202ENST00000532258 1488 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms