Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 TYW1-201ENST00000359626 3348 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 COL21A1-201ENST00000244728 4339 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
POLR2AP24928 MAPK10-329ENST00000641555 2656 ntBASIC8.81□□□□□ -1
POLR2AP24928 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC8.81□□□□□ -1
POLR2AP24928 CXADRP1-201ENST00000398098 1095 ntBASIC8.81□□□□□ -1
POLR2AP24928 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC8.81□□□□□ -1
POLR2AP24928 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC8.81□□□□□ -1
POLR2AP24928 RN7SKP105-201ENST00000517192 314 ntBASIC8.81□□□□□ -1
POLR2AP24928 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC8.81□□□□□ -1
POLR2AP24928 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
POLR2AP24928 CXADRP3-202ENST00000617265 1100 ntBASIC8.81□□□□□ -1
POLR2AP24928 AC008626.2-201ENST00000624425 248 ntBASIC8.81□□□□□ -1
POLR2AP24928 AC135068.11-201ENST00000636378 921 ntBASIC8.81□□□□□ -1
POLR2AP24928 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC8.8□□□□□ -1
POLR2AP24928 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC8.8□□□□□ -1
POLR2AP24928 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
POLR2AP24928 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
POLR2AP24928 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC8.8□□□□□ -1
POLR2AP24928 AC110769.2-201ENST00000602760 1548 ntBASIC8.8□□□□□ -1
POLR2AP24928 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC8.8□□□□□ -1
POLR2AP24928 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC8.8□□□□□ -1
POLR2AP24928 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
POLR2AP24928 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC8.8□□□□□ -1
POLR2AP24928 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
POLR2AP24928 EIF4BP4-201ENST00000441847 1780 ntBASIC8.8□□□□□ -1
POLR2AP24928 DEPDC5-202ENST00000382112 5363 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
POLR2AP24928 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
POLR2AP24928 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.8□□□□□ -1
POLR2AP24928 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
POLR2AP24928 AC008739.5-201ENST00000623035 1938 ntBASIC8.8□□□□□ -1
POLR2AP24928 NUTM1-202ENST00000438749 3922 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
POLR2AP24928 RNA5SP114-201ENST00000363780 113 ntBASIC8.8□□□□□ -1
POLR2AP24928 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.8□□□□□ -1
POLR2AP24928 PDCL3P5-201ENST00000398028 722 ntBASIC8.8□□□□□ -1
POLR2AP24928 CAPNS1P1-201ENST00000401029 633 ntBASIC8.8□□□□□ -1
POLR2AP24928 RPS7-204ENST00000407445 833 ntTSL 2 BASIC8.8□□□□□ -1
POLR2AP24928 RPSAP60-201ENST00000415403 880 ntBASIC8.8□□□□□ -1
POLR2AP24928 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC8.8□□□□□ -1
POLR2AP24928 WDR82P2-201ENST00000444540 928 ntBASIC8.8□□□□□ -1
POLR2AP24928 RPL37P23-201ENST00000492641 294 ntBASIC8.8□□□□□ -1
POLR2AP24928 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC8.8□□□□□ -1
POLR2AP24928 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC8.8□□□□□ -1
POLR2AP24928 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC8.8□□□□□ -1
POLR2AP24928 MTND2P7-201ENST00000521337 640 ntBASIC8.8□□□□□ -1
POLR2AP24928 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC8.8□□□□□ -1
POLR2AP24928 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC8.8□□□□□ -1
POLR2AP24928 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC8.8□□□□□ -1
POLR2AP24928 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC8.8□□□□□ -1
POLR2AP24928 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC8.8□□□□□ -1
POLR2AP24928 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC8.8□□□□□ -1
POLR2AP24928 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC8.8□□□□□ -1
POLR2AP24928 AC036176.3-201ENST00000602456 418 ntBASIC8.8□□□□□ -1
POLR2AP24928 COX6CP16-201ENST00000603667 216 ntBASIC8.8□□□□□ -1
POLR2AP24928 AL008582.1-201ENST00000609612 442 ntBASIC8.8□□□□□ -1
POLR2AP24928 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC8.8□□□□□ -1
POLR2AP24928 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC8.8□□□□□ -1
POLR2AP24928 AC007603.3-201ENST00000636915 979 ntBASIC8.8□□□□□ -1
POLR2AP24928 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
POLR2AP24928 PTGS1-207ENST00000619306 5051 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
POLR2AP24928 AKAP2-202ENST00000374525 6866 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
POLR2AP24928 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC8.8□□□□□ -1
POLR2AP24928 MAP3K19-202ENST00000375844 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
POLR2AP24928 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC8.8□□□□□ -1
POLR2AP24928 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC8.8□□□□□ -1
POLR2AP24928 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
POLR2AP24928 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
POLR2AP24928 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC8.8□□□□□ -1
POLR2AP24928 MYH11-203ENST00000452625 6886 ntTSL 1 (best) BASIC8.8□□□□□ -1
POLR2AP24928 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
POLR2AP24928 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
POLR2AP24928 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
POLR2AP24928 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC8.79□□□□□ -1
POLR2AP24928 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 ECD-205ENST00000454759 2084 ntTSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC8.79□□□□□ -1
POLR2AP24928 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
POLR2AP24928 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 CXCL13-201ENST00000286758 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 RNU1-122P-201ENST00000365538 156 ntBASIC8.79□□□□□ -1
POLR2AP24928 MIR323B-201ENST00000385269 82 ntBASIC8.79□□□□□ -1
POLR2AP24928 BECN1P2-201ENST00000407947 812 ntBASIC8.79□□□□□ -1
POLR2AP24928 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC8.79□□□□□ -1
POLR2AP24928 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.79□□□□□ -1
POLR2AP24928 AC083855.1-201ENST00000440041 258 ntBASIC8.79□□□□□ -1
POLR2AP24928 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC8.79□□□□□ -1
POLR2AP24928 RN7SL70P-201ENST00000478322 302 ntBASIC8.79□□□□□ -1
POLR2AP24928 RN7SL306P-201ENST00000492941 296 ntBASIC8.79□□□□□ -1
POLR2AP24928 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC8.79□□□□□ -1
POLR2AP24928 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
POLR2AP24928 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC8.79□□□□□ -1
POLR2AP24928 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC8.79□□□□□ -1
POLR2AP24928 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC8.79□□□□□ -1
POLR2AP24928 MIR4310-201ENST00000582950 57 ntBASIC8.79□□□□□ -1
POLR2AP24928 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.79□□□□□ -1
POLR2AP24928 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms