Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 CREM-213ENST00000374734 711 ntTSL 5 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 AC019181.1-201ENST00000417151 310 ntBASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 HIPK1-AS1-203ENST00000441071 571 ntTSL 3 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 ARL2BPP7-201ENST00000446421 490 ntBASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 GCNT1P5-201ENST00000449274 682 ntBASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 HSPA8P3-201ENST00000449300 780 ntBASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 AC017002.3-201ENST00000455309 757 ntTSL 2 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 COX7A2L-204ENST00000463055 540 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 CREM-231ENST00000479070 939 ntTSL 5 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 RN7SL864P-201ENST00000493457 285 ntBASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 RN7SL434P-201ENST00000495872 271 ntBASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 GAPDHP44-201ENST00000513513 1007 ntBASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 PGAM1P8-201ENST00000526979 453 ntBASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 AC090092.1-202ENST00000533591 685 ntTSL 5 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 TEX26-AS1-211ENST00000589840 865 ntTSL 5 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 LINC01483-205ENST00000591334 620 ntTSL 4 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 MAGEB3-202ENST00000620842 1129 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCNB1IP1Q9NPC3 SLC3A1-208ENST00000410056 1426 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 HCG18-244ENST00000602516 2890 ntBASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 AC018688.1-201ENST00000636528 1754 ntBASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 AC104581.5-201ENST00000624171 7141 ntBASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 AL391262.1-201ENST00000556558 1992 ntBASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
CCNB1IP1Q9NPC3 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AC013268.3-201ENST00000262716 2324 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 RACK1-201ENST00000376817 965 ntTSL 5 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AC003080.1-201ENST00000413552 767 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 RPL34P19-201ENST00000415903 342 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 RPL3P4-201ENST00000417615 423 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 LINC01425-202ENST00000430060 760 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AC073475.1-201ENST00000434012 592 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AP1B1P1-202ENST00000448124 191 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 TXNP3-201ENST00000454560 301 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 GAPDHP28-201ENST00000455134 1003 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AC074051.1-201ENST00000470389 781 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 RN7SL403P-201ENST00000481783 305 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AC025465.1-201ENST00000503145 797 ntTSL 3 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 AC108073.1-201ENST00000508231 674 ntBASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 GNPDA1-212ENST00000513454 980 ntTSL 5 BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CCNB1IP1Q9NPC3 PPP1R1AP1-201ENST00000525622 425 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms