Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 AC007136.1-201ENST00000589141 199 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 AP000436.1-201ENST00000605239 800 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 AC138904.2-201ENST00000614412 107 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 CRYAB-216ENST00000616970 977 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 AC005383.1-201ENST00000622689 534 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 AC130456.6-201ENST00000623745 765 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.15□□□□□ -1.11
LMO3Q8TAP4 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LMO3Q8TAP4 AC104447.1-201ENST00000624214 2124 ntBASIC8.15□□□□□ -1.11
LMO3Q8TAP4 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
LMO3Q8TAP4 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
LMO3Q8TAP4 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
LMO3Q8TAP4 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC8.15□□□□□ -1.11
LMO3Q8TAP4 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
LMO3Q8TAP4 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC8.15□□□□□ -1.11
LMO3Q8TAP4 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
LMO3Q8TAP4 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC8.15□□□□□ -1.11
LMO3Q8TAP4 AC069222.1-201ENST00000608028 3360 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 RNA5SP483-201ENST00000363431 118 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 RNU1-16P-201ENST00000365477 164 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 SSX6-201ENST00000376932 562 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 OR4F7P-201ENST00000402444 931 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 OR4F1P-201ENST00000405102 938 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 OR4F2P-201ENST00000424047 938 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 EEF1A1P27-201ENST00000429983 1135 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 RN7SL751P-201ENST00000473281 284 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 AC009153.1-201ENST00000485799 496 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 RN7SL124P-201ENST00000498656 285 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 SLC25A14P1-201ENST00000502867 901 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 RPL37-205ENST00000509877 637 ntTSL 5 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 AC022296.2-201ENST00000512424 202 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 AC114801.1-201ENST00000512633 297 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 RN7SL178P-201ENST00000582930 304 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 AL021918.1-201ENST00000603933 236 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 RN7SL760P-201ENST00000607344 270 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 MAPK10-279ENST00000641157 2449 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 OR8B9P-202ENST00000642028 5216 ntBASIC8.14□□□□□ -1.11
LMO3Q8TAP4 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
LMO3Q8TAP4 AL390195.2-201ENST00000564771 2023 ntBASIC8.13□□□□□ -1.11
LMO3Q8TAP4 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 AC087045.3-201ENST00000623046 2468 ntBASIC8.13□□□□□ -1.11
LMO3Q8TAP4 OR7E25P-202ENST00000641088 5937 ntBASIC8.13□□□□□ -1.11
LMO3Q8TAP4 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC8.13□□□□□ -1.11
LMO3Q8TAP4 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms