Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AC025162.2-201ENST00000619602 560 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
UBE4BO95155 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
UBE4BO95155 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
UBE4BO95155 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
UBE4BO95155 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
UBE4BO95155 AC008498.2-201ENST00000624033 2322 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 AC006058.1-201ENST00000568686 5067 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
UBE4BO95155 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
UBE4BO95155 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
UBE4BO95155 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.44□□□□□ -1.06
UBE4BO95155 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
UBE4BO95155 BIN2P2-201ENST00000503900 1303 ntBASIC8.44□□□□□ -1.06
UBE4BO95155 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
UBE4BO95155 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
UBE4BO95155 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
UBE4BO95155 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
UBE4BO95155 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
UBE4BO95155 ATP5A1P10-201ENST00000622403 1603 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC8.43□□□□□ -1.06
UBE4BO95155 TATDN2P1-201ENST00000443767 2331 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
UBE4BO95155 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
UBE4BO95155 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
UBE4BO95155 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
UBE4BO95155 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.43□□□□□ -1.06
UBE4BO95155 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
UBE4BO95155 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
UBE4BO95155 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC8.43□□□□□ -1.06
UBE4BO95155 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC8.43□□□□□ -1.06
UBE4BO95155 RAET1K-201ENST00000403651 784 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 VN1R35P-201ENST00000428102 693 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC8.43□□□□□ -1.06
UBE4BO95155 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
UBE4BO95155 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC8.43□□□□□ -1.06
UBE4BO95155 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC8.43□□□□□ -1.06
UBE4BO95155 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC8.43□□□□□ -1.06
UBE4BO95155 AL390026.1-201ENST00000456647 457 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 RN7SL55P-201ENST00000464534 297 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 RPL12P40-201ENST00000467028 488 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 RN7SL335P-201ENST00000482790 304 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 RN7SL869P-201ENST00000497032 300 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC8.43□□□□□ -1.06
UBE4BO95155 RN7SKP105-201ENST00000517192 314 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC8.43□□□□□ -1.06
UBE4BO95155 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC8.43□□□□□ -1.06
UBE4BO95155 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC8.43□□□□□ -1.06
UBE4BO95155 NUTF2P2-201ENST00000551207 384 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC8.43□□□□□ -1.06
UBE4BO95155 RN7SL237P-201ENST00000580912 287 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 MIR4642-201ENST00000583943 82 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.43□□□□□ -1.06
UBE4BO95155 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC8.43□□□□□ -1.06
UBE4BO95155 AC129492.5-201ENST00000603489 315 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 RN7SL820P-201ENST00000616437 299 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 AC239600.2-201ENST00000619615 1165 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC8.43□□□□□ -1.06
UBE4BO95155 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC8.43□□□□□ -1.06
UBE4BO95155 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
UBE4BO95155 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
UBE4BO95155 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.43□□□□□ -1.06
UBE4BO95155 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
UBE4BO95155 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
UBE4BO95155 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
UBE4BO95155 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC8.43□□□□□ -1.06
UBE4BO95155 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
UBE4BO95155 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
UBE4BO95155 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC8.42□□□□□ -1.06
UBE4BO95155 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC8.42□□□□□ -1.06
UBE4BO95155 RNU1-21P-201ENST00000363327 163 ntBASIC8.42□□□□□ -1.06
UBE4BO95155 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 MIR614-201ENST00000385082 90 ntBASIC8.42□□□□□ -1.06
UBE4BO95155 SNORA35-201ENST00000386104 128 ntBASIC8.42□□□□□ -1.06
UBE4BO95155 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC8.42□□□□□ -1.06
UBE4BO95155 PRELID1P2-201ENST00000407805 396 ntBASIC8.42□□□□□ -1.06
UBE4BO95155 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC8.42□□□□□ -1.06
UBE4BO95155 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 AC092570.2-201ENST00000452117 1143 ntBASIC8.42□□□□□ -1.06
UBE4BO95155 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC8.42□□□□□ -1.06
UBE4BO95155 ALG13-214ENST00000482742 620 ntTSL 2 BASIC8.42□□□□□ -1.06
UBE4BO95155 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC8.42□□□□□ -1.06
UBE4BO95155 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC8.42□□□□□ -1.06
UBE4BO95155 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC8.42□□□□□ -1.06
UBE4BO95155 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC8.42□□□□□ -1.06
UBE4BO95155 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
UBE4BO95155 CHCHD3P2-201ENST00000550751 639 ntBASIC8.42□□□□□ -1.06
UBE4BO95155 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC8.42□□□□□ -1.06
UBE4BO95155 RPL35AP25-201ENST00000584631 330 ntBASIC8.42□□□□□ -1.06
UBE4BO95155 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC8.42□□□□□ -1.06
UBE4BO95155 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms