Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CYP4A11-202ENST00000371904 1760 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 MTUS2-AS1-201ENST00000323380 1992 ntTSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 C1orf220-202ENST00000521244 2577 ntTSL 2 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 ZNF83-211ENST00000597597 4442 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 SCMH1-208ENST00000397171 3186 ntTSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 PNPLA1-201ENST00000312917 1518 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 ANAPC16-204ENST00000615507 3100 ntTSL 3 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 FBN2-208ENST00000619499 10154 ntTSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 SLC39A6-201ENST00000269187 3543 ntAPPRIS P3 TSL 2 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 LINC00494-201ENST00000416742 3544 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 TPP1-215ENST00000533371 3536 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 PLS1-202ENST00000457734 3706 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 ADGRG1-201ENST00000388813 3925 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 KBTBD12-204ENST00000407609 4302 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 GPLD1-201ENST00000230036 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 LILRB1-204ENST00000396327 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 ASH2L-202ENST00000428278 2678 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 MCTP2-203ENST00000451018 2472 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 SMARCD1-205ENST00000548573 2095 ntTSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 AL359922.3-201ENST00000624779 1670 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 ZNF833P-201ENST00000424938 1494 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 AC008033.1-201ENST00000216407 1162 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 DUSP21-201ENST00000339042 885 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 Y_RNA.560-201ENST00000384689 102 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 MT-TH-201ENST00000387441 69 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 RN7SKP33-201ENST00000410942 340 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 BTF3L4P3-201ENST00000418879 476 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 RPL7P53-201ENST00000421245 739 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 AL365273.1-201ENST00000433113 587 ntTSL 2 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 PCMTD1P3-201ENST00000451824 472 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 SUN3-208ENST00000453192 801 ntTSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 AP002371.1-201ENST00000463604 433 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 AC092850.1-201ENST00000464655 1109 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 RPL7P42-201ENST00000481005 679 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 TPT1P3-201ENST00000492841 512 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 RN7SL445P-201ENST00000495609 293 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 DSTNP2-201ENST00000504533 515 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 STMN2-203ENST00000518491 585 ntTSL 2 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 OR5AM1P-201ENST00000532136 1032 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 PRR13-206ENST00000549135 755 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 AC074029.1-201ENST00000552531 1044 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 AL049833.1-201ENST00000557745 840 ntTSL 3 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 AC037479.1-201ENST00000558361 625 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 NMNAT1P5-201ENST00000559657 841 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 EIF5A2P1-201ENST00000564027 460 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 AC010760.1-201ENST00000565129 545 ntTSL 2 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 LINC00555-201ENST00000569288 442 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 DHFRP1-201ENST00000579682 559 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 OR7A1P-201ENST00000601206 970 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 AC073869.3-201ENST00000609270 580 ntTSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 AC090970.3-201ENST00000612566 866 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 AC090517.2-201ENST00000614966 680 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 GPC5-204ENST00000618596 960 ntTSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 PPP6R3-202ENST00000265637 4783 ntTSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 SIX1-201ENST00000247182 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 CU634019.1-201ENST00000623095 2247 ntTSL 2 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 CU633904.1-202ENST00000625096 2247 ntTSL 2 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 HPS5-203ENST00000396253 4725 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 NBPF25P-201ENST00000606775 2019 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 ZAN-204ENST00000546292 8378 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 TTL-201ENST00000233336 14269 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 PRDM15-203ENST00000422911 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 TBC1D22A-AS1-202ENST00000640274 1951 ntBASIC9.88□□□□□ -0.83
LRCH3Q96II8 MADD-205ENST00000395344 4988 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 WRAP53-201ENST00000316024 4011 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LRCH3Q96II8 HSP90AB1-202ENST00000371554 2674 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 ALDH7A1-231ENST00000637206 2466 ntTSL 5 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 STPG1-203ENST00000374409 2804 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
LRCH3Q96II8 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 CES5A-203ENST00000518005 2092 ntTSL 2 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 PTRH2-202ENST00000409433 2246 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 GIGYF2-202ENST00000409196 5747 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 LINC01949-201ENST00000445770 2721 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 RNF40-202ENST00000357890 3917 ntTSL 2 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 DSCAML1-201ENST00000321322 6899 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 GRB2-205ENST00000392564 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LRCH3Q96II8 ZSCAN5B-201ENST00000358992 1626 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
LRCH3Q96II8 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms