Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
COL15A1P39059 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
COL15A1P39059 MRPL32P1-201ENST00000406301 247 ntBASIC9.72□□□□□ -0.85
COL15A1P39059 AC024937.2-201ENST00000411669 1242 ntBASIC9.72□□□□□ -0.85
COL15A1P39059 GAPDHP69-201ENST00000425504 1008 ntBASIC9.72□□□□□ -0.85
COL15A1P39059 RPL35P8-201ENST00000433284 337 ntBASIC9.72□□□□□ -0.85
COL15A1P39059 PHB2P1-201ENST00000434943 890 ntBASIC9.72□□□□□ -0.85
COL15A1P39059 AL590682.1-201ENST00000437248 344 ntBASIC9.72□□□□□ -0.85
COL15A1P39059 GTF2F2P2-201ENST00000445825 721 ntBASIC9.72□□□□□ -0.85
COL15A1P39059 AC019080.2-201ENST00000453859 394 ntBASIC9.72□□□□□ -0.85
COL15A1P39059 AC233724.1-201ENST00000503894 233 ntBASIC9.72□□□□□ -0.85
COL15A1P39059 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC9.72□□□□□ -0.85
COL15A1P39059 EIF1-207ENST00000591776 797 ntTSL 4 BASIC9.72□□□□□ -0.85
COL15A1P39059 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
COL15A1P39059 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
COL15A1P39059 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC9.72□□□□□ -0.85
COL15A1P39059 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC9.72□□□□□ -0.85
COL15A1P39059 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC9.72□□□□□ -0.85
COL15A1P39059 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
COL15A1P39059 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC9.72□□□□□ -0.85
COL15A1P39059 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
COL15A1P39059 FADS2P1-201ENST00000611807 1446 ntBASIC9.72□□□□□ -0.85
COL15A1P39059 IARS-205ENST00000443024 4341 ntTSL 5 BASIC9.72□□□□□ -0.85
COL15A1P39059 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
COL15A1P39059 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC9.71□□□□□ -0.85
COL15A1P39059 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC9.71□□□□□ -0.85
COL15A1P39059 GABRR3-203ENST00000621172 1521 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
COL15A1P39059 SAMMSON-206ENST00000641053 1516 ntBASIC9.71□□□□□ -0.85
COL15A1P39059 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
COL15A1P39059 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC9.71□□□□□ -0.85
COL15A1P39059 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
COL15A1P39059 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
COL15A1P39059 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
COL15A1P39059 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC9.71□□□□□ -0.85
COL15A1P39059 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC9.71□□□□□ -0.85
COL15A1P39059 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
COL15A1P39059 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
COL15A1P39059 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
COL15A1P39059 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
COL15A1P39059 CNGA2-201ENST00000329903 2834 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
COL15A1P39059 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
COL15A1P39059 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
COL15A1P39059 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
COL15A1P39059 U3.14-201ENST00000365363 227 ntBASIC9.71□□□□□ -0.86
COL15A1P39059 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
COL15A1P39059 GAS8-AS1-201ENST00000408886 435 ntBASIC9.71□□□□□ -0.86
COL15A1P39059 BCRP8-201ENST00000412037 255 ntBASIC9.71□□□□□ -0.86
COL15A1P39059 FTOP1-201ENST00000419363 861 ntBASIC9.71□□□□□ -0.86
COL15A1P39059 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC9.71□□□□□ -0.86
COL15A1P39059 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC9.71□□□□□ -0.86
COL15A1P39059 AL133480.2-201ENST00000456723 487 ntBASIC9.71□□□□□ -0.86
COL15A1P39059 RPSAP24-201ENST00000461543 873 ntBASIC9.71□□□□□ -0.86
COL15A1P39059 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC9.71□□□□□ -0.86
COL15A1P39059 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC9.71□□□□□ -0.86
COL15A1P39059 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC9.71□□□□□ -0.86
COL15A1P39059 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
COL15A1P39059 RN7SL778P-201ENST00000607160 297 ntBASIC9.71□□□□□ -0.86
COL15A1P39059 MIR6070-201ENST00000613967 103 ntBASIC9.71□□□□□ -0.86
COL15A1P39059 AC048341.3-201ENST00000619323 491 ntBASIC9.71□□□□□ -0.86
COL15A1P39059 AL451054.1-201ENST00000621770 772 ntBASIC9.71□□□□□ -0.86
COL15A1P39059 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC9.71□□□□□ -0.86
COL15A1P39059 AC129908.1-201ENST00000624553 648 ntBASIC9.71□□□□□ -0.86
COL15A1P39059 MAP3K13-209ENST00000443863 3025 ntTSL 2 BASIC9.71□□□□□ -0.86
COL15A1P39059 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
COL15A1P39059 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
COL15A1P39059 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
COL15A1P39059 AL031123.2-201ENST00000563225 3325 ntBASIC9.71□□□□□ -0.86
COL15A1P39059 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC9.71□□□□□ -0.86
COL15A1P39059 AC130464.1-201ENST00000416201 1500 ntBASIC9.71□□□□□ -0.86
COL15A1P39059 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
COL15A1P39059 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
COL15A1P39059 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
COL15A1P39059 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC9.7□□□□□ -0.86
COL15A1P39059 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
COL15A1P39059 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC9.7□□□□□ -0.86
COL15A1P39059 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
COL15A1P39059 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
COL15A1P39059 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
COL15A1P39059 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC9.7□□□□□ -0.86
COL15A1P39059 WEE2-AS1-206ENST00000478332 2259 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
COL15A1P39059 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
COL15A1P39059 MAPK10-333ENST00000641607 2481 ntBASIC9.7□□□□□ -0.86
COL15A1P39059 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
COL15A1P39059 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
COL15A1P39059 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
COL15A1P39059 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
COL15A1P39059 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
COL15A1P39059 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
COL15A1P39059 SSX9-201ENST00000376909 591 ntBASIC9.7□□□□□ -0.86
COL15A1P39059 RNA5SP177-201ENST00000410122 107 ntBASIC9.7□□□□□ -0.86
COL15A1P39059 RPL5P28-201ENST00000418634 693 ntBASIC9.7□□□□□ -0.86
COL15A1P39059 RPL24P8-201ENST00000446071 474 ntBASIC9.7□□□□□ -0.86
COL15A1P39059 AC104389.2-201ENST00000450768 887 ntBASIC9.7□□□□□ -0.86
COL15A1P39059 SCDP1-201ENST00000455244 1081 ntBASIC9.7□□□□□ -0.86
COL15A1P39059 AL354872.1-201ENST00000456361 967 ntBASIC9.7□□□□□ -0.86
COL15A1P39059 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC9.7□□□□□ -0.86
COL15A1P39059 SNX18P27-201ENST00000523611 779 ntBASIC9.7□□□□□ -0.86
COL15A1P39059 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC9.7□□□□□ -0.86
COL15A1P39059 EGLN3P1-201ENST00000541727 720 ntBASIC9.7□□□□□ -0.86
COL15A1P39059 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms