Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RN7SL496P-201ENST00000470372 290 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 AL355076.1-201ENST00000484315 270 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC8.1□□□□□ -1.11
SLC1A1P43005 POLB-211ENST00000521492 786 ntTSL 2 BASIC8.1□□□□□ -1.11
SLC1A1P43005 AP005597.1-201ENST00000534192 802 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 AC027020.1-201ENST00000559349 632 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 IGHV1OR15-4-201ENST00000560037 348 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 SOD1P2-201ENST00000563903 451 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 ULK4P2-202ENST00000564187 492 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 AC087645.1-201ENST00000588528 291 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 AC016629.2-201ENST00000597341 199 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 SRD5A3-AS1-212ENST00000601433 754 ntTSL 5 BASIC8.1□□□□□ -1.11
SLC1A1P43005 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SLC1A1P43005 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC8.1□□□□□ -1.11
SLC1A1P43005 AC130456.6-201ENST00000623745 765 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 AC134981.1-201ENST00000628076 348 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC8.1□□□□□ -1.11
SLC1A1P43005 AC010653.3-201ENST00000635332 232 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 CASC19-208ENST00000641056 1292 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 CASC19-227ENST00000641411 1285 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
SLC1A1P43005 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC8.1□□□□□ -1.11
SLC1A1P43005 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.1□□□□□ -1.11
SLC1A1P43005 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SLC1A1P43005 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC8.1□□□□□ -1.11
SLC1A1P43005 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 MFSD8-218ENST00000641186 4448 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 AC010886.1-201ENST00000437380 2869 ntBASIC8.09□□□□□ -1.11
SLC1A1P43005 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 AL445250.1-203ENST00000641829 1535 ntBASIC8.09□□□□□ -1.11
SLC1A1P43005 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC8.09□□□□□ -1.11
SLC1A1P43005 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.09□□□□□ -1.11
SLC1A1P43005 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.09□□□□□ -1.11
SLC1A1P43005 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.09□□□□□ -1.11
SLC1A1P43005 CDYLP1-201ENST00000419017 1458 ntBASIC8.09□□□□□ -1.11
SLC1A1P43005 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC8.09□□□□□ -1.11
SLC1A1P43005 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 TRIM51HP-202ENST00000530412 1823 ntBASIC8.09□□□□□ -1.11
SLC1A1P43005 RNU1-47P-201ENST00000362966 163 ntBASIC8.09□□□□□ -1.11
SLC1A1P43005 SNORD46-201ENST00000364043 104 ntBASIC8.09□□□□□ -1.11
SLC1A1P43005 RN7SKP50-201ENST00000364694 315 ntBASIC8.09□□□□□ -1.11
SLC1A1P43005 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC8.09□□□□□ -1.11
SLC1A1P43005 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC8.09□□□□□ -1.11
SLC1A1P43005 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC8.09□□□□□ -1.11
SLC1A1P43005 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC8.09□□□□□ -1.11
SLC1A1P43005 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.09□□□□□ -1.11
SLC1A1P43005 SNX18P8-201ENST00000455120 874 ntBASIC8.09□□□□□ -1.11
SLC1A1P43005 RN7SL272P-201ENST00000487762 289 ntBASIC8.09□□□□□ -1.11
SLC1A1P43005 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC8.09□□□□□ -1.11
SLC1A1P43005 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC8.09□□□□□ -1.11
SLC1A1P43005 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC8.09□□□□□ -1.11
SLC1A1P43005 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC8.09□□□□□ -1.11
SLC1A1P43005 THAP2-202ENST00000547843 672 ntTSL 2 BASIC8.09□□□□□ -1.11
SLC1A1P43005 CDH13-207ENST00000565636 810 ntTSL 5 BASIC8.09□□□□□ -1.11
SLC1A1P43005 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC8.09□□□□□ -1.11
SLC1A1P43005 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC8.09□□□□□ -1.11
SLC1A1P43005 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC8.09□□□□□ -1.11
SLC1A1P43005 AC073911.1-201ENST00000592296 504 ntTSL 5 BASIC8.09□□□□□ -1.11
SLC1A1P43005 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC8.09□□□□□ -1.11
SLC1A1P43005 AC004918.3-201ENST00000602609 925 ntBASIC8.09□□□□□ -1.11
SLC1A1P43005 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC8.09□□□□□ -1.11
SLC1A1P43005 CACNB2-214ENST00000612743 597 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 AC099654.4-201ENST00000614168 1059 ntBASIC8.09□□□□□ -1.11
SLC1A1P43005 AC074029.3-201ENST00000618623 312 ntBASIC8.09□□□□□ -1.11
SLC1A1P43005 MIR3120-201ENST00000636555 81 ntBASIC8.09□□□□□ -1.11
SLC1A1P43005 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
SLC1A1P43005 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.09□□□□□ -1.11
SLC1A1P43005 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SLC1A1P43005 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.12
SLC1A1P43005 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
SLC1A1P43005 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
SLC1A1P43005 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
SLC1A1P43005 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC8.08□□□□□ -1.12
SLC1A1P43005 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.08□□□□□ -1.12
SLC1A1P43005 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.08□□□□□ -1.12
SLC1A1P43005 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 AL139805.2-201ENST00000455305 2433 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms