Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SMG7-216ENST00000638826 219 ntTSL 2 BASIC8.12□□□□□ -1.11
SLC1A1P43005 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SLC1A1P43005 COL6A4P1-202ENST00000487147 4317 ntBASIC8.12□□□□□ -1.11
SLC1A1P43005 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SLC1A1P43005 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SLC1A1P43005 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC8.12□□□□□ -1.11
SLC1A1P43005 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
SLC1A1P43005 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SLC1A1P43005 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.12□□□□□ -1.11
SLC1A1P43005 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
SLC1A1P43005 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
SLC1A1P43005 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
SLC1A1P43005 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SLC1A1P43005 MAPK10-290ENST00000641237 2826 ntBASIC8.11□□□□□ -1.11
SLC1A1P43005 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
SLC1A1P43005 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
SLC1A1P43005 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC8.11□□□□□ -1.11
SLC1A1P43005 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC8.11□□□□□ -1.11
SLC1A1P43005 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.11□□□□□ -1.11
SLC1A1P43005 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
SLC1A1P43005 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
SLC1A1P43005 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
SLC1A1P43005 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
SLC1A1P43005 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC8.11□□□□□ -1.11
SLC1A1P43005 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
SLC1A1P43005 LST1-211ENST00000376110 433 ntTSL 3 BASIC8.11□□□□□ -1.11
SLC1A1P43005 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC8.11□□□□□ -1.11
SLC1A1P43005 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.11□□□□□ -1.11
SLC1A1P43005 AL122003.1-201ENST00000435206 784 ntBASIC8.11□□□□□ -1.11
SLC1A1P43005 AL512882.1-201ENST00000436086 832 ntBASIC8.11□□□□□ -1.11
SLC1A1P43005 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC8.11□□□□□ -1.11
SLC1A1P43005 AL161454.1-201ENST00000446226 569 ntBASIC8.11□□□□□ -1.11
SLC1A1P43005 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC8.11□□□□□ -1.11
SLC1A1P43005 RN7SL505P-201ENST00000482644 293 ntBASIC8.11□□□□□ -1.11
SLC1A1P43005 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC8.11□□□□□ -1.11
SLC1A1P43005 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 LACRT-203ENST00000547511 504 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
SLC1A1P43005 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC8.11□□□□□ -1.11
SLC1A1P43005 OR11J5P-201ENST00000556889 934 ntBASIC8.11□□□□□ -1.11
SLC1A1P43005 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC8.11□□□□□ -1.11
SLC1A1P43005 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC8.11□□□□□ -1.11
SLC1A1P43005 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.11□□□□□ -1.11
SLC1A1P43005 AC244090.2-201ENST00000567614 792 ntBASIC8.11□□□□□ -1.11
SLC1A1P43005 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC8.11□□□□□ -1.11
SLC1A1P43005 MIR4682-201ENST00000580643 80 ntBASIC8.11□□□□□ -1.11
SLC1A1P43005 HNRNPA1P67-201ENST00000604027 926 ntBASIC8.11□□□□□ -1.11
SLC1A1P43005 AL109933.4-201ENST00000612111 157 ntBASIC8.11□□□□□ -1.11
SLC1A1P43005 AC010480.1-201ENST00000624823 684 ntBASIC8.11□□□□□ -1.11
SLC1A1P43005 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC8.11□□□□□ -1.11
SLC1A1P43005 AC073488.2-201ENST00000631903 751 ntBASIC8.11□□□□□ -1.11
SLC1A1P43005 AC073488.5-201ENST00000631993 754 ntBASIC8.11□□□□□ -1.11
SLC1A1P43005 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.11□□□□□ -1.11
SLC1A1P43005 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 TBCCD1-201ENST00000338733 2441 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SLC1A1P43005 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
SLC1A1P43005 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.1□□□□□ -1.11
SLC1A1P43005 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC8.1□□□□□ -1.11
SLC1A1P43005 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
SLC1A1P43005 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 CCNG2-205ENST00000509972 1549 ntTSL 2 BASIC8.1□□□□□ -1.11
SLC1A1P43005 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 NF1P7-201ENST00000612076 1530 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
SLC1A1P43005 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SLC1A1P43005 RAET1K-201ENST00000403651 784 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 RPSAP72-201ENST00000407020 358 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 OR8B9P-201ENST00000419756 925 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 RBMY2FP-202ENST00000420346 1263 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC8.1□□□□□ -1.11
SLC1A1P43005 RPL5P6-201ENST00000425640 886 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 APCDD1L-AS1-204ENST00000427794 461 ntTSL 3 BASIC8.1□□□□□ -1.11
SLC1A1P43005 METTL8P1-201ENST00000428182 611 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC8.1□□□□□ -1.11
SLC1A1P43005 GAPDHP32-201ENST00000433816 998 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 AC016734.1-201ENST00000436998 654 ntBASIC8.1□□□□□ -1.11
SLC1A1P43005 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SLC1A1P43005 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC8.1□□□□□ -1.11
SLC1A1P43005 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms