Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC9.79□□□□□ -0.84
COL15A1P39059 AC244100.4-201ENST00000617747 388 ntBASIC9.79□□□□□ -0.84
COL15A1P39059 AC007347.2-201ENST00000623044 180 ntBASIC9.79□□□□□ -0.84
COL15A1P39059 AC093909.6-201ENST00000624757 775 ntBASIC9.79□□□□□ -0.84
COL15A1P39059 AC091132.4-201ENST00000587960 2262 ntBASIC9.79□□□□□ -0.84
COL15A1P39059 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
COL15A1P39059 EEF1A1P16-201ENST00000325349 1414 ntBASIC9.79□□□□□ -0.84
COL15A1P39059 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
COL15A1P39059 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
COL15A1P39059 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
COL15A1P39059 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
COL15A1P39059 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
COL15A1P39059 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
COL15A1P39059 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
COL15A1P39059 AC007126.1-201ENST00000508202 4781 ntBASIC9.79□□□□□ -0.84
COL15A1P39059 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
COL15A1P39059 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
COL15A1P39059 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
COL15A1P39059 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC9.79□□□□□ -0.84
COL15A1P39059 AL357556.1-201ENST00000421884 1388 ntBASIC9.78□□□□□ -0.84
COL15A1P39059 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COL15A1P39059 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
COL15A1P39059 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
COL15A1P39059 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC9.78□□□□□ -0.84
COL15A1P39059 SNORA10B-201ENST00000384458 133 ntBASIC9.78□□□□□ -0.84
COL15A1P39059 SNORA70I-201ENST00000384544 135 ntBASIC9.78□□□□□ -0.84
COL15A1P39059 RPL36P1-201ENST00000419720 225 ntBASIC9.78□□□□□ -0.84
COL15A1P39059 GAPDHP73-201ENST00000423411 1007 ntBASIC9.78□□□□□ -0.84
COL15A1P39059 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC9.78□□□□□ -0.84
COL15A1P39059 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
COL15A1P39059 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
COL15A1P39059 CBX5P1-201ENST00000468470 561 ntBASIC9.78□□□□□ -0.84
COL15A1P39059 AC022730.1-201ENST00000473114 568 ntBASIC9.78□□□□□ -0.84
COL15A1P39059 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC9.78□□□□□ -0.84
COL15A1P39059 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
COL15A1P39059 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC9.78□□□□□ -0.84
COL15A1P39059 AP005597.1-201ENST00000534192 802 ntBASIC9.78□□□□□ -0.84
COL15A1P39059 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC9.78□□□□□ -0.84
COL15A1P39059 AC108451.2-201ENST00000603875 538 ntBASIC9.78□□□□□ -0.84
COL15A1P39059 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
COL15A1P39059 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
COL15A1P39059 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC9.78□□□□□ -0.84
COL15A1P39059 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
COL15A1P39059 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC9.78□□□□□ -0.84
COL15A1P39059 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
COL15A1P39059 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COL15A1P39059 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
COL15A1P39059 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC9.78□□□□□ -0.84
COL15A1P39059 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
COL15A1P39059 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
COL15A1P39059 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
COL15A1P39059 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
COL15A1P39059 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
COL15A1P39059 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
COL15A1P39059 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COL15A1P39059 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
COL15A1P39059 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COL15A1P39059 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC9.77□□□□□ -0.84
COL15A1P39059 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
COL15A1P39059 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
COL15A1P39059 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
COL15A1P39059 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
COL15A1P39059 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
COL15A1P39059 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
COL15A1P39059 ARMCX7P-201ENST00000372828 562 ntBASIC9.77□□□□□ -0.84
COL15A1P39059 TYMSP1-201ENST00000407851 869 ntBASIC9.77□□□□□ -0.84
COL15A1P39059 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC9.77□□□□□ -0.84
COL15A1P39059 PPIAP30-201ENST00000415473 519 ntBASIC9.77□□□□□ -0.84
COL15A1P39059 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC9.77□□□□□ -0.84
COL15A1P39059 GAS5-211ENST00000432536 959 ntTSL 2 BASIC9.77□□□□□ -0.84
COL15A1P39059 RPS7P4-201ENST00000444127 582 ntBASIC9.77□□□□□ -0.84
COL15A1P39059 RPS4XP19-201ENST00000460237 736 ntBASIC9.77□□□□□ -0.84
COL15A1P39059 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.84
COL15A1P39059 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC9.77□□□□□ -0.84
COL15A1P39059 TRIM60P14-201ENST00000513444 1419 ntBASIC9.77□□□□□ -0.84
COL15A1P39059 RN7SKP2-201ENST00000517003 319 ntBASIC9.77□□□□□ -0.84
COL15A1P39059 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC9.77□□□□□ -0.84
COL15A1P39059 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC9.77□□□□□ -0.84
COL15A1P39059 AP001636.1-201ENST00000531997 1122 ntBASIC9.77□□□□□ -0.84
COL15A1P39059 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC9.77□□□□□ -0.84
COL15A1P39059 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC9.77□□□□□ -0.84
COL15A1P39059 FDPSP3-201ENST00000556903 1013 ntBASIC9.77□□□□□ -0.84
COL15A1P39059 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC9.77□□□□□ -0.84
COL15A1P39059 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC9.77□□□□□ -0.84
COL15A1P39059 AP001554.1-201ENST00000604533 376 ntBASIC9.77□□□□□ -0.84
COL15A1P39059 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
COL15A1P39059 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC9.77□□□□□ -0.84
COL15A1P39059 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
COL15A1P39059 MAPK10-343ENST00000641677 2546 ntBASIC9.77□□□□□ -0.85
COL15A1P39059 XRCC6P4-201ENST00000518193 2067 ntBASIC9.77□□□□□ -0.85
COL15A1P39059 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
COL15A1P39059 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
COL15A1P39059 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
COL15A1P39059 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
COL15A1P39059 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
COL15A1P39059 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC9.77□□□□□ -0.85
COL15A1P39059 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC9.77□□□□□ -0.85
COL15A1P39059 GTF2IP1-202ENST00000614592 2047 ntBASIC9.77□□□□□ -0.85
COL15A1P39059 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
COL15A1P39059 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms