Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC7.39□□□□□ -1.23
SCN2BO60939 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SCN2BO60939 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
SCN2BO60939 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCN2BO60939 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCN2BO60939 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCN2BO60939 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.39□□□□□ -1.23
SCN2BO60939 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
SCN2BO60939 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCN2BO60939 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SCN2BO60939 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
SCN2BO60939 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCN2BO60939 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
SCN2BO60939 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.39□□□□□ -1.23
SCN2BO60939 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN2BO60939 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
SCN2BO60939 AL355974.1-201ENST00000618896 1708 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 AC130464.1-201ENST00000416201 1500 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 AC012213.2-201ENST00000562917 4597 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC7.38□□□□□ -1.23
SCN2BO60939 SCHLAP1-201ENST00000629145 1436 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SCN2BO60939 GLRX-202ENST00000379979 1366 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN2BO60939 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.38□□□□□ -1.23
SCN2BO60939 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN2BO60939 PSG9-203ENST00000291752 1055 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SCN2BO60939 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SCN2BO60939 RNA5SP23-201ENST00000391006 105 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN2BO60939 VN1R13P-201ENST00000406212 885 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 GSTA10P-201ENST00000412182 576 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 AC068138.1-201ENST00000412635 217 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN2BO60939 RPL12P19-201ENST00000429825 486 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN2BO60939 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC7.38□□□□□ -1.23
SCN2BO60939 AL024493.1-201ENST00000449217 833 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 GAS5-219ENST00000449289 542 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN2BO60939 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SCN2BO60939 RPL12P5-201ENST00000475149 392 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 RPL7AP26-201ENST00000488538 813 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC7.38□□□□□ -1.23
SCN2BO60939 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.38□□□□□ -1.23
SCN2BO60939 AC091175.1-201ENST00000522168 572 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN2BO60939 AP003174.3-201ENST00000537926 516 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 AEBP2-207ENST00000541908 975 ntAPPRIS ALT2 TSL 3 BASIC7.38□□□□□ -1.23
SCN2BO60939 LINC01490-201ENST00000548705 638 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN2BO60939 AC012038.1-201ENST00000551279 552 ntTSL 4 BASIC7.38□□□□□ -1.23
SCN2BO60939 ULK4P2-202ENST00000564187 492 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN2BO60939 MIR3714-201ENST00000579507 65 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC7.38□□□□□ -1.23
SCN2BO60939 SNX29P2-204ENST00000603801 875 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 SNORD91A-202ENST00000609620 191 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC7.38□□□□□ -1.23
SCN2BO60939 CU638689.2-201ENST00000623809 818 ntBASIC7.38□□□□□ -1.23
SCN2BO60939 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC7.38□□□□□ -1.23
SCN2BO60939 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN2BO60939 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SCN2BO60939 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SCN2BO60939 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN2BO60939 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN2BO60939 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
SCN2BO60939 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SCN2BO60939 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SCN2BO60939 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.38□□□□□ -1.23
SCN2BO60939 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.38□□□□□ -1.23
SCN2BO60939 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.38□□□□□ -1.23
SCN2BO60939 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN2BO60939 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN2BO60939 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN2BO60939 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN2BO60939 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.38□□□□□ -1.23
SCN2BO60939 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SCN2BO60939 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.37□□□□□ -1.23
SCN2BO60939 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.37□□□□□ -1.23
SCN2BO60939 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SCN2BO60939 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCN2BO60939 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCN2BO60939 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN2BO60939 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCN2BO60939 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.37□□□□□ -1.23
SCN2BO60939 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.37□□□□□ -1.23
SCN2BO60939 MITF-202ENST00000314589 1993 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN2BO60939 AC096745.2-201ENST00000627783 1914 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.37□□□□□ -1.23
SCN2BO60939 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SCN2BO60939 SNORA71D-201ENST00000363484 134 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 SNORA7B-201ENST00000384360 139 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 IL6-202ENST00000401630 765 ntTSL 5 BASIC7.37□□□□□ -1.23
SCN2BO60939 VDAC1P8-201ENST00000406025 853 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SCN2BO60939 RN7SKP119-201ENST00000410753 273 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 RN7SKP207-201ENST00000411204 303 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 AL008626.1-201ENST00000412357 775 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN2BO60939 YWHAZP3-201ENST00000415292 738 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN2BO60939 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SCN2BO60939 ST13P13-201ENST00000417082 1092 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 AL031282.1-204ENST00000418950 497 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms