Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 AL356652.1-201ENST00000615962 565 ntBASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 AC100791.3-201ENST00000617619 330 ntBASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGA11Q9Y5H2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 RARRES2P4-201ENST00000514074 484 ntBASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA11Q9Y5H2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA11Q9Y5H2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA11Q9Y5H2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.52■□□□□ 0.71
PCDHGA11Q9Y5H2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA11Q9Y5H2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA11Q9Y5H2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA11Q9Y5H2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA11Q9Y5H2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 MCRIP2P1-201ENST00000394346 511 ntBASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 AC007322.1-201ENST00000426983 750 ntBASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 AC069236.1-201ENST00000604339 616 ntBASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PCDHGA11Q9Y5H2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA11Q9Y5H2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGA11Q9Y5H2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PCDHGA11Q9Y5H2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA11Q9Y5H2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA11Q9Y5H2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA11Q9Y5H2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA11Q9Y5H2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGA11Q9Y5H2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGA11Q9Y5H2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGA11Q9Y5H2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGA11Q9Y5H2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms