Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.6■■□□□ 1.69
RTCBQ9Y3I0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RTCBQ9Y3I0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC25.6■■□□□ 1.69
RTCBQ9Y3I0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
RTCBQ9Y3I0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RTCBQ9Y3I0 AC027702.1-201ENST00000563810 1770 ntBASIC25.59■■□□□ 1.69
RTCBQ9Y3I0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
RTCBQ9Y3I0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RTCBQ9Y3I0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
RTCBQ9Y3I0 SLC25A3P1-201ENST00000443844 931 ntBASIC25.59■■□□□ 1.69
RTCBQ9Y3I0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC25.59■■□□□ 1.69
RTCBQ9Y3I0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
RTCBQ9Y3I0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
RTCBQ9Y3I0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC25.59■■□□□ 1.69
RTCBQ9Y3I0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC25.59■■□□□ 1.69
RTCBQ9Y3I0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTCBQ9Y3I0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.59■■□□□ 1.69
RTCBQ9Y3I0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTCBQ9Y3I0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 NIFKP9-201ENST00000419265 221 ntBASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.58■■□□□ 1.69
RTCBQ9Y3I0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
RTCBQ9Y3I0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 MIR2861-201ENST00000636310 90 ntBASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
RTCBQ9Y3I0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 KRT16P1-201ENST00000399124 1418 ntBASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 DUX4L26-201ENST00000489078 1255 ntBASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 NTF6B-201ENST00000591913 560 ntBASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTCBQ9Y3I0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
RTCBQ9Y3I0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
RTCBQ9Y3I0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC25.55■■□□□ 1.68
RTCBQ9Y3I0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RTCBQ9Y3I0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RTCBQ9Y3I0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC25.55■■□□□ 1.68
RTCBQ9Y3I0 AC104076.2-201ENST00000448912 469 ntBASIC25.55■■□□□ 1.68
RTCBQ9Y3I0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RTCBQ9Y3I0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
RTCBQ9Y3I0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
RTCBQ9Y3I0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC25.55■■□□□ 1.68
RTCBQ9Y3I0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.55■■□□□ 1.68
RTCBQ9Y3I0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RTCBQ9Y3I0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTCBQ9Y3I0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms