Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF11Q9Y3C5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 MFSD11-216ENST00000590393 1141 ntBASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF11Q9Y3C5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 AC016405.3-201ENST00000607710 860 ntBASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF11Q9Y3C5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 AC016769.1-201ENST00000409132 1010 ntBASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 AC013268.1-206ENST00000638368 961 ntBASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 AC112229.1-201ENST00000639295 961 ntBASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF11Q9Y3C5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 AC007322.4-201ENST00000509611 723 ntBASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 AC011767.1-201ENST00000617410 1153 ntBASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF11Q9Y3C5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms