Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.99■□□□□ 0.47
POLR1DQ9Y2S0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1DQ9Y2S0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1DQ9Y2S0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1DQ9Y2S0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1DQ9Y2S0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 AL391422.3-201ENST00000603791 2761 ntBASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 KRT18P5-201ENST00000436075 1291 ntBASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.98■□□□□ 0.47
POLR1DQ9Y2S0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 PCDHAC2-203ENST00000615316 3011 ntBASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 TERF1P5-201ENST00000477545 1207 ntBASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.97■□□□□ 0.47
POLR1DQ9Y2S0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 AC013268.1-206ENST00000638368 961 ntBASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 AC112229.1-201ENST00000639295 961 ntBASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR1DQ9Y2S0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.96■□□□□ 0.46
POLR1DQ9Y2S0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.96■□□□□ 0.46
POLR1DQ9Y2S0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 PGM5P4-201ENST00000421970 445 ntBASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 AL591742.1-201ENST00000604433 565 ntBASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 MIR5787-201ENST00000611784 55 ntBASIC17.95■□□□□ 0.46
POLR1DQ9Y2S0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms