Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
FNDC3AQ9Y2H6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FNDC3AQ9Y2H6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FNDC3AQ9Y2H6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 AC008550.1-201ENST00000511500 884 ntBASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FNDC3AQ9Y2H6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms