Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RNF6Q9Y252 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF6Q9Y252 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
RNF6Q9Y252 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF6Q9Y252 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF6Q9Y252 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF6Q9Y252 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RNF6Q9Y252 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF6Q9Y252 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RNF6Q9Y252 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF6Q9Y252 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF6Q9Y252 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
RNF6Q9Y252 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF6Q9Y252 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.93■□□□□ 0.62
RNF6Q9Y252 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF6Q9Y252 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF6Q9Y252 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF6Q9Y252 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
RNF6Q9Y252 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF6Q9Y252 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.93■□□□□ 0.62
RNF6Q9Y252 AC105036.2-201ENST00000569468 176 ntBASIC18.93■□□□□ 0.62
RNF6Q9Y252 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF6Q9Y252 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF6Q9Y252 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF6Q9Y252 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF6Q9Y252 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RNF6Q9Y252 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF6Q9Y252 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
RNF6Q9Y252 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RNF6Q9Y252 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF6Q9Y252 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RNF6Q9Y252 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF6Q9Y252 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF6Q9Y252 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
RNF6Q9Y252 AC099778.1-201ENST00000568593 1911 ntBASIC18.92■□□□□ 0.62
RNF6Q9Y252 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF6Q9Y252 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF6Q9Y252 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF6Q9Y252 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF6Q9Y252 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RNF6Q9Y252 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF6Q9Y252 AC133552.2-202ENST00000575694 574 ntBASIC18.92■□□□□ 0.62
RNF6Q9Y252 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF6Q9Y252 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF6Q9Y252 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF6Q9Y252 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF6Q9Y252 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF6Q9Y252 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF6Q9Y252 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF6Q9Y252 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF6Q9Y252 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
RNF6Q9Y252 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF6Q9Y252 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF6Q9Y252 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF6Q9Y252 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF6Q9Y252 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF6Q9Y252 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF6Q9Y252 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF6Q9Y252 AC069152.1-201ENST00000438030 544 ntBASIC18.91■□□□□ 0.62
RNF6Q9Y252 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF6Q9Y252 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF6Q9Y252 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF6Q9Y252 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF6Q9Y252 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF6Q9Y252 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF6Q9Y252 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF6Q9Y252 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF6Q9Y252 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RNF6Q9Y252 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF6Q9Y252 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF6Q9Y252 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF6Q9Y252 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF6Q9Y252 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RNF6Q9Y252 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF6Q9Y252 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF6Q9Y252 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF6Q9Y252 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF6Q9Y252 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF6Q9Y252 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RNF6Q9Y252 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF6Q9Y252 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF6Q9Y252 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF6Q9Y252 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF6Q9Y252 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.9■□□□□ 0.62
RNF6Q9Y252 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF6Q9Y252 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF6Q9Y252 AC133041.1-202ENST00000642053 222 ntBASIC18.9■□□□□ 0.62
RNF6Q9Y252 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF6Q9Y252 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF6Q9Y252 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF6Q9Y252 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF6Q9Y252 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF6Q9Y252 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF6Q9Y252 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF6Q9Y252 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF6Q9Y252 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF6Q9Y252 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF6Q9Y252 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.89■□□□□ 0.62
RNF6Q9Y252 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RNF6Q9Y252 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms