Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC105020.6-201ENST00000621523 1217 ntBASIC18.58■□□□□ 0.56
NPIPA1Q9UND3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
NPIPA1Q9UND3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
NPIPA1Q9UND3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA1Q9UND3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA1Q9UND3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 KRT17P3-201ENST00000420566 1262 ntBASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 RPS2P4-201ENST00000476944 856 ntBASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPIPA1Q9UND3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 SOX15-203ENST00000570788 1093 ntBASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 AC006128.1-201ENST00000624704 1661 ntBASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.56■□□□□ 0.56
NPIPA1Q9UND3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 AL359736.2-201ENST00000621992 437 ntBASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA1Q9UND3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 FAM197Y4-202ENST00000622692 608 ntBASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPA1Q9UND3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms