Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 RPS2P55-201ENST00000397318 883 ntBASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 AC107956.1-201ENST00000494359 873 ntBASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 RN7SL850P-201ENST00000579959 291 ntBASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 AL353708.3-201ENST00000610272 989 ntBASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NOTCH3Q9UM47 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 AC010331.1-201ENST00000611423 582 ntBASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 AC133561.5-201ENST00000635547 218 ntBASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NOTCH3Q9UM47 TSPY15P-201ENST00000457163 923 ntBASIC15.52■□□□□ 0.08
NOTCH3Q9UM47 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.52■□□□□ 0.08
NOTCH3Q9UM47 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.52■□□□□ 0.08
NOTCH3Q9UM47 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.52■□□□□ 0.08
NOTCH3Q9UM47 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.52■□□□□ 0.08
NOTCH3Q9UM47 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NOTCH3Q9UM47 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NOTCH3Q9UM47 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NOTCH3Q9UM47 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NOTCH3Q9UM47 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NOTCH3Q9UM47 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.52■□□□□ 0.07
NOTCH3Q9UM47 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NOTCH3Q9UM47 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.52■□□□□ 0.07
NOTCH3Q9UM47 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NOTCH3Q9UM47 FAM99A-202ENST00000538190 1989 ntBASIC15.52■□□□□ 0.07
NOTCH3Q9UM47 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NOTCH3Q9UM47 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
NOTCH3Q9UM47 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NOTCH3Q9UM47 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NOTCH3Q9UM47 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.52■□□□□ 0.07
NOTCH3Q9UM47 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.52■□□□□ 0.07
NOTCH3Q9UM47 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NOTCH3Q9UM47 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NOTCH3Q9UM47 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 TSPY7P-201ENST00000431358 1114 ntBASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 AC012306.2-201ENST00000609350 630 ntBASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 AC087633.2-202ENST00000565166 1439 ntBASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.51■□□□□ 0.07
NOTCH3Q9UM47 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms