Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 AC103702.1-201ENST00000548801 2630 ntBASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 AC021242.3-201ENST00000607598 1377 ntBASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 MIR6722-201ENST00000617286 78 ntBASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 AL353803.4-201ENST00000565882 1934 ntBASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.78■□□□□ 0.92
PRDM4Q9UKN5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 AL354751.1-201ENST00000412768 1863 ntBASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 BX664725.1-201ENST00000438252 379 ntBASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 Z82202.1-201ENST00000623446 1880 ntBASIC20.77■□□□□ 0.92
PRDM4Q9UKN5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PRDM4Q9UKN5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PRDM4Q9UKN5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM4Q9UKN5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.75■□□□□ 0.91
PRDM4Q9UKN5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms