Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX41Q9UJV9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DDX41Q9UJV9 AC092368.3-202ENST00000574180 1591 ntBASIC23.14■■□□□ 1.3
DDX41Q9UJV9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
DDX41Q9UJV9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.14■■□□□ 1.3
DDX41Q9UJV9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
DDX41Q9UJV9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.14■■□□□ 1.3
DDX41Q9UJV9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX41Q9UJV9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
DDX41Q9UJV9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
DDX41Q9UJV9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
DDX41Q9UJV9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX41Q9UJV9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX41Q9UJV9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
DDX41Q9UJV9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
DDX41Q9UJV9 UNC93B4-201ENST00000505679 747 ntBASIC23.14■■□□□ 1.29
DDX41Q9UJV9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
DDX41Q9UJV9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.14■■□□□ 1.29
DDX41Q9UJV9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.14■■□□□ 1.29
DDX41Q9UJV9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
DDX41Q9UJV9 AC087633.2-202ENST00000565166 1439 ntBASIC23.14■■□□□ 1.29
DDX41Q9UJV9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.14■■□□□ 1.29
DDX41Q9UJV9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.14■■□□□ 1.29
DDX41Q9UJV9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.13■■□□□ 1.29
DDX41Q9UJV9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX41Q9UJV9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX41Q9UJV9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
DDX41Q9UJV9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX41Q9UJV9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.13■■□□□ 1.29
DDX41Q9UJV9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
DDX41Q9UJV9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX41Q9UJV9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX41Q9UJV9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
DDX41Q9UJV9 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.13■■□□□ 1.29
DDX41Q9UJV9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.13■■□□□ 1.29
DDX41Q9UJV9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX41Q9UJV9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
DDX41Q9UJV9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
DDX41Q9UJV9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX41Q9UJV9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.13■■□□□ 1.29
DDX41Q9UJV9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 AL158047.1-201ENST00000445918 881 ntBASIC23.12■■□□□ 1.29
DDX41Q9UJV9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DDX41Q9UJV9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 C2orf69P4-201ENST00000565394 541 ntBASIC23.11■■□□□ 1.29
DDX41Q9UJV9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX41Q9UJV9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX41Q9UJV9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms