Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EBF1Q9UH73 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
EBF1Q9UH73 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EBF1Q9UH73 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EBF1Q9UH73 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EBF1Q9UH73 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EBF1Q9UH73 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
EBF1Q9UH73 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EBF1Q9UH73 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EBF1Q9UH73 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EBF1Q9UH73 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EBF1Q9UH73 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EBF1Q9UH73 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EBF1Q9UH73 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EBF1Q9UH73 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EBF1Q9UH73 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 PKD1P6-201ENST00000343738 4769 ntBASIC20.56■□□□□ 0.88
EBF1Q9UH73 AC026310.3-201ENST00000625186 2373 ntBASIC20.56■□□□□ 0.88
EBF1Q9UH73 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.56■□□□□ 0.88
EBF1Q9UH73 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.55■□□□□ 0.88
EBF1Q9UH73 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EBF1Q9UH73 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.55■□□□□ 0.88
EBF1Q9UH73 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
EBF1Q9UH73 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
EBF1Q9UH73 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
EBF1Q9UH73 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EBF1Q9UH73 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
EBF1Q9UH73 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EBF1Q9UH73 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EBF1Q9UH73 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.55■□□□□ 0.88
EBF1Q9UH73 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.55■□□□□ 0.88
EBF1Q9UH73 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
EBF1Q9UH73 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.55■□□□□ 0.88
EBF1Q9UH73 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EBF1Q9UH73 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.55■□□□□ 0.88
EBF1Q9UH73 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
EBF1Q9UH73 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EBF1Q9UH73 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
EBF1Q9UH73 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EBF1Q9UH73 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EBF1Q9UH73 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.54■□□□□ 0.88
EBF1Q9UH73 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.54■□□□□ 0.88
EBF1Q9UH73 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EBF1Q9UH73 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.54■□□□□ 0.88
EBF1Q9UH73 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EBF1Q9UH73 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.54■□□□□ 0.88
EBF1Q9UH73 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.54■□□□□ 0.88
EBF1Q9UH73 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
EBF1Q9UH73 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
EBF1Q9UH73 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.54■□□□□ 0.88
EBF1Q9UH73 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EBF1Q9UH73 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EBF1Q9UH73 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EBF1Q9UH73 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EBF1Q9UH73 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.53■□□□□ 0.88
EBF1Q9UH73 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
EBF1Q9UH73 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.53■□□□□ 0.88
EBF1Q9UH73 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.53■□□□□ 0.88
EBF1Q9UH73 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EBF1Q9UH73 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.53■□□□□ 0.88
EBF1Q9UH73 RARRES2P10-201ENST00000564312 460 ntBASIC20.53■□□□□ 0.88
EBF1Q9UH73 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EBF1Q9UH73 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EBF1Q9UH73 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.53■□□□□ 0.88
EBF1Q9UH73 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EBF1Q9UH73 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EBF1Q9UH73 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EBF1Q9UH73 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
EBF1Q9UH73 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.53■□□□□ 0.88
EBF1Q9UH73 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EBF1Q9UH73 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EBF1Q9UH73 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
EBF1Q9UH73 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EBF1Q9UH73 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
EBF1Q9UH73 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.53■□□□□ 0.88
EBF1Q9UH73 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EBF1Q9UH73 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
EBF1Q9UH73 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
EBF1Q9UH73 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EBF1Q9UH73 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms