Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 AC005181.1-201ENST00000604782 1256 ntBASIC18.31■□□□□ 0.52
NPAP1Q9NZP6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.31■□□□□ 0.52
NPAP1Q9NZP6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAP1Q9NZP6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAP1Q9NZP6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAP1Q9NZP6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.31■□□□□ 0.52
NPAP1Q9NZP6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
NPAP1Q9NZP6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAP1Q9NZP6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAP1Q9NZP6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.31■□□□□ 0.52
NPAP1Q9NZP6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 POU5F1P4-201ENST00000413175 1085 ntBASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 PCDHAC2-203ENST00000615316 3011 ntBASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAP1Q9NZP6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPAP1Q9NZP6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPAP1Q9NZP6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NPAP1Q9NZP6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPAP1Q9NZP6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAP1Q9NZP6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAP1Q9NZP6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
NPAP1Q9NZP6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.29■□□□□ 0.52
NPAP1Q9NZP6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.29■□□□□ 0.52
NPAP1Q9NZP6 TERF1P5-201ENST00000477545 1207 ntBASIC18.29■□□□□ 0.52
NPAP1Q9NZP6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.29■□□□□ 0.52
NPAP1Q9NZP6 AL109923.1-201ENST00000618799 583 ntBASIC18.29■□□□□ 0.52
NPAP1Q9NZP6 AC120498.10-201ENST00000621827 505 ntBASIC18.29■□□□□ 0.52
NPAP1Q9NZP6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAP1Q9NZP6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPAP1Q9NZP6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAP1Q9NZP6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 GPX1P1-201ENST00000388829 606 ntBASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 AC013268.1-206ENST00000638368 961 ntBASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 AC112229.1-201ENST00000639295 961 ntBASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAP1Q9NZP6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPAP1Q9NZP6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.51
NPAP1Q9NZP6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPAP1Q9NZP6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.26■□□□□ 0.51
NPAP1Q9NZP6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPAP1Q9NZP6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAP1Q9NZP6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPAP1Q9NZP6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.26■□□□□ 0.51
NPAP1Q9NZP6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms