Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NDE1Q9NXR1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.47■□□□□ 0.71
NDE1Q9NXR1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NDE1Q9NXR1 AC093503.3-201ENST00000624917 2352 ntBASIC19.47■□□□□ 0.71
NDE1Q9NXR1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 AC005224.4-201ENST00000583262 1652 ntBASIC19.46■□□□□ 0.71
NDE1Q9NXR1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDE1Q9NXR1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.45■□□□□ 0.7
NDE1Q9NXR1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 AC133561.4-201ENST00000566112 224 ntBASIC19.44■□□□□ 0.7
NDE1Q9NXR1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 AC053503.5-201ENST00000601508 636 ntBASIC19.44■□□□□ 0.7
NDE1Q9NXR1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDE1Q9NXR1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms