Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC52A3Q9NQ40 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 AC004854.2-201ENST00000608450 1441 ntBASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC52A3Q9NQ40 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 KRT18P61-201ENST00000585825 1298 ntBASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 PTBP1P-201ENST00000554374 1601 ntBASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC52A3Q9NQ40 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.08■□□□□ 0.65
SLC52A3Q9NQ40 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC52A3Q9NQ40 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.08■□□□□ 0.65
SLC52A3Q9NQ40 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC52A3Q9NQ40 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SLC52A3Q9NQ40 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC52A3Q9NQ40 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC52A3Q9NQ40 Z82202.1-201ENST00000623446 1880 ntBASIC19.08■□□□□ 0.65
SLC52A3Q9NQ40 AC009237.14-201ENST00000609975 1594 ntBASIC19.08■□□□□ 0.65
SLC52A3Q9NQ40 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC52A3Q9NQ40 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC52A3Q9NQ40 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.08■□□□□ 0.64
SLC52A3Q9NQ40 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC52A3Q9NQ40 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SLC52A3Q9NQ40 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SLC52A3Q9NQ40 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC52A3Q9NQ40 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC52A3Q9NQ40 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC52A3Q9NQ40 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
SLC52A3Q9NQ40 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.08■□□□□ 0.64
SLC52A3Q9NQ40 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 MIR935-201ENST00000401179 91 ntBASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 AC005837.3-201ENST00000612163 286 ntBASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC52A3Q9NQ40 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms