Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 FAM21FP-204ENST00000608637 956 ntBASIC21.09■□□□□ 0.97
CD248Q9HCU0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CD248Q9HCU0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
CD248Q9HCU0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
CD248Q9HCU0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD248Q9HCU0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CD248Q9HCU0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CD248Q9HCU0 FEM1AP1-201ENST00000431297 1995 ntBASIC21.08■□□□□ 0.97
CD248Q9HCU0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CD248Q9HCU0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.08■□□□□ 0.97
CD248Q9HCU0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CD248Q9HCU0 PCDHAC2-203ENST00000615316 3011 ntBASIC21.08■□□□□ 0.97
CD248Q9HCU0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.08■□□□□ 0.97
CD248Q9HCU0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CD248Q9HCU0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CD248Q9HCU0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.08■□□□□ 0.97
CD248Q9HCU0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.08■□□□□ 0.97
CD248Q9HCU0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.08■□□□□ 0.97
CD248Q9HCU0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.08■□□□□ 0.97
CD248Q9HCU0 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.08■□□□□ 0.97
CD248Q9HCU0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.08■□□□□ 0.97
CD248Q9HCU0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.08■□□□□ 0.97
CD248Q9HCU0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CD248Q9HCU0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.08■□□□□ 0.97
CD248Q9HCU0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CD248Q9HCU0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.08■□□□□ 0.97
CD248Q9HCU0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CD248Q9HCU0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
CD248Q9HCU0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.96
CD248Q9HCU0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CD248Q9HCU0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.07■□□□□ 0.96
CD248Q9HCU0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CD248Q9HCU0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD248Q9HCU0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD248Q9HCU0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CD248Q9HCU0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.07■□□□□ 0.96
CD248Q9HCU0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD248Q9HCU0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD248Q9HCU0 ESRRAP1-201ENST00000400596 1257 ntBASIC21.07■□□□□ 0.96
CD248Q9HCU0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CD248Q9HCU0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.07■□□□□ 0.96
CD248Q9HCU0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.07■□□□□ 0.96
CD248Q9HCU0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.07■□□□□ 0.96
CD248Q9HCU0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD248Q9HCU0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD248Q9HCU0 KRT17P1-201ENST00000399211 1546 ntBASIC21.07■□□□□ 0.96
CD248Q9HCU0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CD248Q9HCU0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.07■□□□□ 0.96
CD248Q9HCU0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD248Q9HCU0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.06■□□□□ 0.96
CD248Q9HCU0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CD248Q9HCU0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CD248Q9HCU0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.06■□□□□ 0.96
CD248Q9HCU0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.06■□□□□ 0.96
CD248Q9HCU0 AC093827.2-201ENST00000512654 315 ntBASIC21.06■□□□□ 0.96
CD248Q9HCU0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CD248Q9HCU0 AC100791.3-201ENST00000617619 330 ntBASIC21.06■□□□□ 0.96
CD248Q9HCU0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CD248Q9HCU0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD248Q9HCU0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CD248Q9HCU0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD248Q9HCU0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD248Q9HCU0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD248Q9HCU0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD248Q9HCU0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 RPS2P52-201ENST00000469610 820 ntBASIC21.05■□□□□ 0.96
CD248Q9HCU0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CD248Q9HCU0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD248Q9HCU0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.05■□□□□ 0.96
CD248Q9HCU0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms