Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.67■□□□□ 0.58
UBQLN3Q9H347 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN3Q9H347 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN3Q9H347 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
UBQLN3Q9H347 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN3Q9H347 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN3Q9H347 CYP21A1P-202ENST00000354927 1481 ntBASIC18.67■□□□□ 0.58
UBQLN3Q9H347 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN3Q9H347 AL355472.2-201ENST00000422958 438 ntBASIC18.67■□□□□ 0.58
UBQLN3Q9H347 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.67■□□□□ 0.58
UBQLN3Q9H347 KRT18P6-201ENST00000555540 1265 ntBASIC18.67■□□□□ 0.58
UBQLN3Q9H347 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.67■□□□□ 0.58
UBQLN3Q9H347 KRT17P1-201ENST00000399211 1546 ntBASIC18.67■□□□□ 0.58
UBQLN3Q9H347 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN3Q9H347 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBQLN3Q9H347 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UBQLN3Q9H347 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 PCDHAC2-203ENST00000615316 3011 ntBASIC18.66■□□□□ 0.58
UBQLN3Q9H347 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 AC091874.3-201ENST00000512672 1195 ntBASIC18.66■□□□□ 0.58
UBQLN3Q9H347 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UBQLN3Q9H347 AL162377.1-201ENST00000618844 1793 ntBASIC18.65■□□□□ 0.58
UBQLN3Q9H347 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
UBQLN3Q9H347 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.64■□□□□ 0.58
UBQLN3Q9H347 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
UBQLN3Q9H347 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBQLN3Q9H347 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.64■□□□□ 0.58
UBQLN3Q9H347 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 KRT18P68-201ENST00000392293 1000 ntBASIC18.64■□□□□ 0.57
UBQLN3Q9H347 LSM12P1-201ENST00000411836 588 ntBASIC18.64■□□□□ 0.57
UBQLN3Q9H347 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 DUSP5P2-201ENST00000426873 1033 ntBASIC18.64■□□□□ 0.57
UBQLN3Q9H347 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.64■□□□□ 0.57
UBQLN3Q9H347 AC083880.1-201ENST00000608266 535 ntBASIC18.64■□□□□ 0.57
UBQLN3Q9H347 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms