Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.25□□□□□ -1.411e-6■■■■□ 20.6
CSTF2TQ9H0L4 F11-AS1-203ENST00000508287 669 ntTSL 34.44□□□□□ -1.71e-6■■■■□ 20.6
CSTF2TQ9H0L4 GSE1-215ENST00000635906 666 ntTSL 311.26□□□□□ -0.614e-7■■■■□ 20.6
CSTF2TQ9H0L4 RHBDF2-202ENST00000585701 572 ntTSL 413.05□□□□□ -0.324e-7■■■■□ 20.6
CSTF2TQ9H0L4 RHBDF2-210ENST00000591192 554 ntTSL 410.54□□□□□ -0.724e-7■■■■□ 20.6
CSTF2TQ9H0L4 MAEA-216ENST00000512308 839 ntTSL 515.94■□□□□ 0.141e-6■■■■□ 20.6
CSTF2TQ9H0L4 MAEA-211ENST00000509254 598 ntTSL 415.07■□□□□ 01e-6■■■■□ 20.6
CSTF2TQ9H0L4 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.992e-7■■■■□ 20.6
CSTF2TQ9H0L4 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -12e-7■■■■□ 20.6
CSTF2TQ9H0L4 EHBP1-205ENST00000413434 533 ntTSL 48.77□□□□□ -1.015e-11■■■■□ 20.6
CSTF2TQ9H0L4 EHBP1-207ENST00000426940 586 ntTSL 47.49□□□□□ -1.215e-11■■■■□ 20.6
CSTF2TQ9H0L4 EHBP1-219ENST00000494958 1127 ntTSL 1 (best)5.76□□□□□ -1.495e-11■■■■□ 20.6
CSTF2TQ9H0L4 CHID1-224ENST00000534254 1019 ntTSL 512.88□□□□□ -0.353e-7■■■■□ 20.6
CSTF2TQ9H0L4 CHID1-219ENST00000531859 834 ntTSL 512.18□□□□□ -0.463e-7■■■■□ 20.6
CSTF2TQ9H0L4 CHID1-207ENST00000524832 878 ntTSL 210.27□□□□□ -0.773e-7■■■■□ 20.6
CSTF2TQ9H0L4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.37■□□□□ 0.537e-17■■■■□ 20.6
CSTF2TQ9H0L4 ESPN-217ENST00000636644 544 ntTSL 517.03■□□□□ 0.327e-17■■■■□ 20.6
CSTF2TQ9H0L4 ESPN-214ENST00000633239 1494 ntTSL 517.02■□□□□ 0.327e-17■■■■□ 20.6
CSTF2TQ9H0L4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.87■□□□□ 0.297e-17■■■■□ 20.6
CSTF2TQ9H0L4 ESPN-207ENST00000475228 813 ntTSL 516.18■□□□□ 0.187e-17■■■■□ 20.6
CSTF2TQ9H0L4 ESPN-209ENST00000477679 885 ntTSL 213.4□□□□□ -0.267e-17■■■■□ 20.6
CSTF2TQ9H0L4 ESPN-204ENST00000434576 750 ntTSL 313.4□□□□□ -0.267e-17■■■■□ 20.6
CSTF2TQ9H0L4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.297e-17■■■■□ 20.6
CSTF2TQ9H0L4 FAM207A-203ENST00000458015 643 ntTSL 518.76■□□□□ 0.591e-6■■■■□ 20.6
CSTF2TQ9H0L4 ADAP1-214ENST00000495686 586 ntTSL 415.72■□□□□ 0.113e-6■■■■□ 20.6
CSTF2TQ9H0L4 XPO1-212ENST00000457483 488 ntTSL 46.33□□□□□ -1.43e-17■■■■□ 20.6
CSTF2TQ9H0L4 XPO1-220ENST00000481214 720 ntTSL 25.41□□□□□ -1.543e-17■■■■□ 20.6
CSTF2TQ9H0L4 GREB1-210ENST00000628795 438 ntTSL 54.74□□□□□ -1.651e-8■■■■□ 20.6
CSTF2TQ9H0L4 YWHAE-209ENST00000572108 258 ntTSL 39.39□□□□□ -0.914e-10■■■■□ 20.6
CSTF2TQ9H0L4 RPH3AL-214ENST00000574722 586 ntTSL 414.44□□□□□ -0.16e-7■■■■□ 20.6
CSTF2TQ9H0L4 CARS-204ENST00000439280 1021 ntTSL 316.71■□□□□ 0.279e-7■■■■□ 20.6
CSTF2TQ9H0L4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.53■□□□□ 0.089e-7■■■■□ 20.6
CSTF2TQ9H0L4 CARS-207ENST00000465331 583 ntTSL 313.14□□□□□ -0.319e-7■■■■□ 20.6
CSTF2TQ9H0L4 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.57□□□□□ -0.49e-7■■■■□ 20.6
CSTF2TQ9H0L4 CARS-213ENST00000527330 564 ntTSL 412.13□□□□□ -0.479e-7■■■■□ 20.6
CSTF2TQ9H0L4 CARS-211ENST00000524825 550 ntTSL 412.13□□□□□ -0.479e-7■■■■□ 20.6
CSTF2TQ9H0L4 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC11.86□□□□□ -0.519e-7■■■■□ 20.6
CSTF2TQ9H0L4 CARS-216ENST00000639317 135 ntTSL 5 BASIC11.17□□□□□ -0.629e-7■■■■□ 20.6
CSTF2TQ9H0L4 CARS-202ENST00000380525 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.649e-7■■■■□ 20.6
CSTF2TQ9H0L4 CARS-212ENST00000526890 5732 ntTSL 210.92□□□□□ -0.669e-7■■■■□ 20.6
CSTF2TQ9H0L4 CARS-215ENST00000531387 2805 ntTSL 29.65□□□□□ -0.869e-7■■■■□ 20.6
CSTF2TQ9H0L4 METTL22-201ENST00000163678 1510 ntTSL 1 (best)15.82■□□□□ 0.123e-8■■■■□ 20.5
CSTF2TQ9H0L4 METTL22-216ENST00000568967 1672 ntTSL 215.25■□□□□ 0.033e-8■■■■□ 20.5
CSTF2TQ9H0L4 METTL22-218ENST00000572956 706 ntTSL 311.58□□□□□ -0.563e-8■■■■□ 20.5
CSTF2TQ9H0L4 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.653e-8■■■■□ 20.5
CSTF2TQ9H0L4 METTL22-202ENST00000381920 4984 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.753e-8■■■■□ 20.5
CSTF2TQ9H0L4 METTL22-208ENST00000563501 519 ntTSL 510.17□□□□□ -0.783e-8■■■■□ 20.5
CSTF2TQ9H0L4 METTL22-204ENST00000561993 656 ntTSL 27.02□□□□□ -1.293e-8■■■■□ 20.5
CSTF2TQ9H0L4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.83■□□□□ 0.929e-7■■■■□ 20.5
CSTF2TQ9H0L4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.4■□□□□ 0.869e-7■■■■□ 20.5
CSTF2TQ9H0L4 FOXP1-207ENST00000471386 299 ntTSL 1 (best)23.93■■□□□ 1.422e-6■■■■□ 20.5
CSTF2TQ9H0L4 TCEA2-209ENST00000465111 2357 ntTSL 214.74□□□□□ -0.051e-7■■■■□ 20.5
CSTF2TQ9H0L4 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.334e-7■■■■□ 20.5
CSTF2TQ9H0L4 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.334e-7■■■■□ 20.5
CSTF2TQ9H0L4 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.474e-7■■■■□ 20.5
CSTF2TQ9H0L4 RNF220-207ENST00000470498 594 ntTSL 35.76□□□□□ -1.494e-7■■■■□ 20.5
CSTF2TQ9H0L4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.296e-7■■■■□ 20.5
CSTF2TQ9H0L4 CTSD-204ENST00000433655 2006 ntTSL 515.46■□□□□ 0.076e-7■■■■□ 20.5
CSTF2TQ9H0L4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.026e-7■■■■□ 20.5
CSTF2TQ9H0L4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.116e-7■■■■□ 20.5
CSTF2TQ9H0L4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.136e-7■■■■□ 20.5
CSTF2TQ9H0L4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.226e-7■■■■□ 20.5
CSTF2TQ9H0L4 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.56e-7■■■■□ 20.5
CSTF2TQ9H0L4 MAPK8-207ENST00000395611 5844 ntAPPRIS ALT1 TSL 2 BASIC10.19□□□□□ -0.785e-8■■■■□ 20.5
CSTF2TQ9H0L4 MAPK8-206ENST00000374189 5796 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.835e-8■■■■□ 20.5
CSTF2TQ9H0L4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.484e-7■■■■□ 20.5
CSTF2TQ9H0L4 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.97□□□□□ -0.174e-7■■■■□ 20.5
CSTF2TQ9H0L4 BID-214ENST00000617586 542 ntTSL 5 BASIC19.86■□□□□ 0.771e-6■■■■□ 20.5
CSTF2TQ9H0L4 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.57■□□□□ 0.721e-6■■■■□ 20.5
CSTF2TQ9H0L4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.39■□□□□ 0.691e-6■■■■□ 20.5
CSTF2TQ9H0L4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.61e-6■■■■□ 20.5
CSTF2TQ9H0L4 BID-206ENST00000473439 638 ntTSL 218.44■□□□□ 0.541e-6■■■■□ 20.5
CSTF2TQ9H0L4 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.19■□□□□ 0.51e-6■■■■□ 20.5
CSTF2TQ9H0L4 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.12■□□□□ 0.491e-6■■■■□ 20.5
CSTF2TQ9H0L4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.41e-6■■■■□ 20.5
CSTF2TQ9H0L4 BID-208ENST00000550946 1394 ntTSL 1 (best)17.49■□□□□ 0.391e-6■■■■□ 20.5
CSTF2TQ9H0L4 BID-210ENST00000552886 330 ntTSL 312.89□□□□□ -0.351e-6■■■■□ 20.5
CSTF2TQ9H0L4 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.391e-6■■■■□ 20.5
CSTF2TQ9H0L4 BID-211ENST00000611040 419 ntTSL 1 (best) BASIC11.29□□□□□ -0.61e-6■■■■□ 20.5
CSTF2TQ9H0L4 CD81-208ENST00000492252 1136 ntTSL 316.96■□□□□ 0.311e-6■■■■□ 20.5
CSTF2TQ9H0L4 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.21■□□□□ 0.031e-6■■■■□ 20.5
CSTF2TQ9H0L4 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC11.5□□□□□ -0.571e-6■■■■□ 20.5
CSTF2TQ9H0L4 AGO2-209ENST00000523609 3050 ntTSL 1 (best)10.7□□□□□ -0.71e-6■■■■□ 20.5
CSTF2TQ9H0L4 AGO2-202ENST00000517293 422 ntTSL 36.32□□□□□ -1.41e-6■■■■□ 20.5
CSTF2TQ9H0L4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.551e-6■■■■□ 20.5
CSTF2TQ9H0L4 KDELR1-202ENST00000594643 561 ntTSL 218.79■□□□□ 0.64e-8■■■■□ 20.5
CSTF2TQ9H0L4 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.322e-6■■■■□ 20.5
CSTF2TQ9H0L4 KDELR1-205ENST00000600980 815 ntTSL 38.17□□□□□ -1.12e-6■■■■□ 20.5
CSTF2TQ9H0L4 KDELR1-204ENST00000599084 582 ntTSL 27.97□□□□□ -1.132e-6■■■■□ 20.5
CSTF2TQ9H0L4 PUM2-210ENST00000442400 955 ntTSL 57.63□□□□□ -1.193e-11■■■■□ 20.5
CSTF2TQ9H0L4 PUM2-208ENST00000432105 584 ntTSL 56.61□□□□□ -1.353e-11■■■■□ 20.5
CSTF2TQ9H0L4 PUM2-205ENST00000420234 562 ntTSL 54.9□□□□□ -1.633e-11■■■■□ 20.5
CSTF2TQ9H0L4 AGPAT3-208ENST00000448287 454 ntTSL 311.12□□□□□ -0.631e-6■■■■□ 20.5
CSTF2TQ9H0L4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.71■□□□□ 0.11e-6■■■■□ 20.5
CSTF2TQ9H0L4 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.711e-6■■■■□ 20.5
CSTF2TQ9H0L4 SMAD2-210ENST00000587421 575 ntTSL 413.03□□□□□ -0.328e-10■■■■□ 20.5
CSTF2TQ9H0L4 ST6GAL1-207ENST00000438590 608 ntTSL 311.07□□□□□ -0.649e-8■■■■□ 20.5
CSTF2TQ9H0L4 ST6GAL1-212ENST00000448408 1005 ntTSL 59.44□□□□□ -0.99e-8■■■■□ 20.5
CSTF2TQ9H0L4 ST6GAL1-204ENST00000423451 602 ntTSL 49.36□□□□□ -0.919e-8■■■■□ 20.5
CSTF2TQ9H0L4 ST6GAL1-210ENST00000446170 588 ntTSL 48.37□□□□□ -1.079e-8■■■■□ 20.5
Retrieved 100 of 19,151 protein–RNA pairs in 144.3 ms