Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 AC006128.1-201ENST00000624704 1661 ntBASIC20.96■□□□□ 0.95
RNF38Q9H0F5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF38Q9H0F5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 PTBP1P-201ENST00000554374 1601 ntBASIC20.95■□□□□ 0.94
RNF38Q9H0F5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
RNF38Q9H0F5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 AC124016.1-201ENST00000609552 612 ntBASIC20.94■□□□□ 0.94
RNF38Q9H0F5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF38Q9H0F5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF38Q9H0F5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF38Q9H0F5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF38Q9H0F5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF38Q9H0F5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF38Q9H0F5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF38Q9H0F5 AC124283.5-201ENST00000624661 1809 ntBASIC20.93■□□□□ 0.94
RNF38Q9H0F5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF38Q9H0F5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
RNF38Q9H0F5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF38Q9H0F5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.93■□□□□ 0.94
RNF38Q9H0F5 Z99916.2-201ENST00000604037 246 ntBASIC20.93■□□□□ 0.94
RNF38Q9H0F5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
RNF38Q9H0F5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF38Q9H0F5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF38Q9H0F5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF38Q9H0F5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF38Q9H0F5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF38Q9H0F5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RNF38Q9H0F5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF38Q9H0F5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF38Q9H0F5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF38Q9H0F5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
RNF38Q9H0F5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
RNF38Q9H0F5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF38Q9H0F5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF38Q9H0F5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF38Q9H0F5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF38Q9H0F5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms