Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLPBQ9H078 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CLPBQ9H078 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.25■□□□□ 0.83
CLPBQ9H078 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CLPBQ9H078 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CLPBQ9H078 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CLPBQ9H078 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.25■□□□□ 0.83
CLPBQ9H078 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
CLPBQ9H078 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.25■□□□□ 0.83
CLPBQ9H078 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.24■□□□□ 0.83
CLPBQ9H078 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPBQ9H078 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPBQ9H078 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLPBQ9H078 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPBQ9H078 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPBQ9H078 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.24■□□□□ 0.83
CLPBQ9H078 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.24■□□□□ 0.83
CLPBQ9H078 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.24■□□□□ 0.83
CLPBQ9H078 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPBQ9H078 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CLPBQ9H078 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLPBQ9H078 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.24■□□□□ 0.83
CLPBQ9H078 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPBQ9H078 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLPBQ9H078 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.24■□□□□ 0.83
CLPBQ9H078 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
CLPBQ9H078 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPBQ9H078 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPBQ9H078 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLPBQ9H078 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPBQ9H078 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLPBQ9H078 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPBQ9H078 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLPBQ9H078 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPBQ9H078 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPBQ9H078 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.23■□□□□ 0.83
CLPBQ9H078 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPBQ9H078 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.23■□□□□ 0.83
CLPBQ9H078 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
CLPBQ9H078 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLPBQ9H078 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPBQ9H078 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
CLPBQ9H078 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPBQ9H078 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLPBQ9H078 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPBQ9H078 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.22■□□□□ 0.83
CLPBQ9H078 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.22■□□□□ 0.83
CLPBQ9H078 AC073314.1-201ENST00000568729 2216 ntBASIC20.22■□□□□ 0.83
CLPBQ9H078 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPBQ9H078 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPBQ9H078 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPBQ9H078 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPBQ9H078 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPBQ9H078 KRT18P68-201ENST00000392293 1000 ntBASIC20.22■□□□□ 0.83
CLPBQ9H078 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLPBQ9H078 PGM5P4-201ENST00000421970 445 ntBASIC20.22■□□□□ 0.83
CLPBQ9H078 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.22■□□□□ 0.83
CLPBQ9H078 UNC93B5-201ENST00000530315 699 ntBASIC20.22■□□□□ 0.83
CLPBQ9H078 AL589743.5-201ENST00000616611 1050 ntBASIC20.22■□□□□ 0.83
CLPBQ9H078 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPBQ9H078 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPBQ9H078 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.22■□□□□ 0.83
CLPBQ9H078 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPBQ9H078 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLPBQ9H078 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPBQ9H078 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPBQ9H078 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CLPBQ9H078 AP005212.1-201ENST00000581547 1997 ntBASIC20.21■□□□□ 0.83
CLPBQ9H078 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.21■□□□□ 0.83
CLPBQ9H078 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPBQ9H078 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.21■□□□□ 0.83
CLPBQ9H078 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLPBQ9H078 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPBQ9H078 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CLPBQ9H078 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.21■□□□□ 0.83
CLPBQ9H078 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CLPBQ9H078 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.21■□□□□ 0.83
CLPBQ9H078 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLPBQ9H078 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CLPBQ9H078 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPBQ9H078 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPBQ9H078 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPBQ9H078 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPBQ9H078 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLPBQ9H078 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLPBQ9H078 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLPBQ9H078 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CLPBQ9H078 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.83
CLPBQ9H078 LINC01006-201ENST00000333319 2292 ntBASIC20.2■□□□□ 0.82
CLPBQ9H078 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CLPBQ9H078 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.2■□□□□ 0.82
CLPBQ9H078 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLPBQ9H078 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.2■□□□□ 0.82
CLPBQ9H078 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLPBQ9H078 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CLPBQ9H078 CYP21A1P-202ENST00000354927 1481 ntBASIC20.2■□□□□ 0.82
CLPBQ9H078 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLPBQ9H078 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.2■□□□□ 0.82
CLPBQ9H078 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLPBQ9H078 AC098590.1-201ENST00000468126 897 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms