Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 AC133637.1-201ENST00000624115 1537 ntBASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 AC010141.3-201ENST00000456659 717 ntBASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 ABHD17AP3-201ENST00000503096 1137 ntBASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 AC241377.3-202ENST00000626088 1088 ntBASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 AC241585.3-202ENST00000628937 1088 ntBASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 AC245100.8-202ENST00000629247 1058 ntBASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC5.44□□□□□ -1.54
LCE3DQ9BYE3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 TCF3P1-201ENST00000423021 1937 ntBASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms