Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.68■■□□□ 1.54
RTFDC1Q9BY42 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTFDC1Q9BY42 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTFDC1Q9BY42 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.67■■□□□ 1.54
RTFDC1Q9BY42 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC24.67■■□□□ 1.54
RTFDC1Q9BY42 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RTFDC1Q9BY42 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTFDC1Q9BY42 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTFDC1Q9BY42 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
RTFDC1Q9BY42 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC24.67■■□□□ 1.54
RTFDC1Q9BY42 DECR2-212ENST00000627716 352 ntTSL 2 BASIC24.67■■□□□ 1.54
RTFDC1Q9BY42 GLDC-219ENST00000640208 420 ntTSL 2 BASIC24.67■■□□□ 1.54
RTFDC1Q9BY42 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
RTFDC1Q9BY42 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
RTFDC1Q9BY42 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RTFDC1Q9BY42 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.67■■□□□ 1.54
RTFDC1Q9BY42 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.67■■□□□ 1.54
RTFDC1Q9BY42 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTFDC1Q9BY42 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTFDC1Q9BY42 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC24.66■■□□□ 1.54
RTFDC1Q9BY42 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC24.66■■□□□ 1.54
RTFDC1Q9BY42 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC24.66■■□□□ 1.54
RTFDC1Q9BY42 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC24.66■■□□□ 1.54
RTFDC1Q9BY42 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC24.66■■□□□ 1.54
RTFDC1Q9BY42 NT5C-211ENST00000582170 653 ntTSL 3 BASIC24.66■■□□□ 1.54
RTFDC1Q9BY42 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RTFDC1Q9BY42 AC012676.1-201ENST00000574705 1949 ntBASIC24.66■■□□□ 1.54
RTFDC1Q9BY42 AC244015.2-201ENST00000616358 1861 ntBASIC24.66■■□□□ 1.54
RTFDC1Q9BY42 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTFDC1Q9BY42 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 PNN-205ENST00000556530 601 ntTSL 2 BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 AC005363.2-201ENST00000618631 242 ntBASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 MIR2861-201ENST00000636310 90 ntBASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTFDC1Q9BY42 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
RTFDC1Q9BY42 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RTFDC1Q9BY42 EP400NL-214ENST00000641289 2402 ntBASIC24.64■■□□□ 1.54
RTFDC1Q9BY42 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC24.64■■□□□ 1.54
RTFDC1Q9BY42 UNC93B2-201ENST00000285383 730 ntBASIC24.64■■□□□ 1.54
RTFDC1Q9BY42 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RTFDC1Q9BY42 AL590326.2-201ENST00000625139 305 ntBASIC24.64■■□□□ 1.54
RTFDC1Q9BY42 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
RTFDC1Q9BY42 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
RTFDC1Q9BY42 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC24.64■■□□□ 1.53
RTFDC1Q9BY42 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
RTFDC1Q9BY42 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTFDC1Q9BY42 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTFDC1Q9BY42 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC24.63■■□□□ 1.53
RTFDC1Q9BY42 AP000525.1-201ENST00000608286 694 ntBASIC24.63■■□□□ 1.53
RTFDC1Q9BY42 AC004264.1-201ENST00000608354 794 ntBASIC24.63■■□□□ 1.53
RTFDC1Q9BY42 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
RTFDC1Q9BY42 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RTFDC1Q9BY42 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RTFDC1Q9BY42 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.63■■□□□ 1.53
RTFDC1Q9BY42 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.62■■□□□ 1.53
RTFDC1Q9BY42 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RTFDC1Q9BY42 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RTFDC1Q9BY42 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
RTFDC1Q9BY42 AC005521.1-201ENST00000393351 872 ntBASIC24.62■■□□□ 1.53
RTFDC1Q9BY42 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC24.62■■□□□ 1.53
RTFDC1Q9BY42 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC24.62■■□□□ 1.53
RTFDC1Q9BY42 AC116562.2-201ENST00000507042 360 ntBASIC24.62■■□□□ 1.53
RTFDC1Q9BY42 AL049597.2-201ENST00000565575 961 ntBASIC24.62■■□□□ 1.53
RTFDC1Q9BY42 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.62■■□□□ 1.53
RTFDC1Q9BY42 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RTFDC1Q9BY42 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RTFDC1Q9BY42 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 ARMC10P1-201ENST00000313754 855 ntBASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RTFDC1Q9BY42 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms