Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 AC010141.2-201ENST00000452426 721 ntBASIC17.27■□□□□ 0.36
NICN1Q9BSH3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 SLC7A5P2-201ENST00000553010 536 ntBASIC17.27■□□□□ 0.36
NICN1Q9BSH3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NICN1Q9BSH3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
NICN1Q9BSH3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NICN1Q9BSH3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NICN1Q9BSH3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NICN1Q9BSH3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
NICN1Q9BSH3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.27■□□□□ 0.35
NICN1Q9BSH3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.26■□□□□ 0.35
NICN1Q9BSH3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
NICN1Q9BSH3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NICN1Q9BSH3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NICN1Q9BSH3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NICN1Q9BSH3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NICN1Q9BSH3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.26■□□□□ 0.35
NICN1Q9BSH3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.26■□□□□ 0.35
NICN1Q9BSH3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.26■□□□□ 0.35
NICN1Q9BSH3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NICN1Q9BSH3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.26■□□□□ 0.35
NICN1Q9BSH3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.26■□□□□ 0.35
NICN1Q9BSH3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NICN1Q9BSH3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.26■□□□□ 0.35
NICN1Q9BSH3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 IRS3P-201ENST00000223076 1006 ntBASIC17.25■□□□□ 0.35
NICN1Q9BSH3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NICN1Q9BSH3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 DPP3P2-201ENST00000416030 1696 ntBASIC17.24■□□□□ 0.35
NICN1Q9BSH3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 AC104187.1-201ENST00000607510 612 ntBASIC17.24■□□□□ 0.35
NICN1Q9BSH3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NICN1Q9BSH3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 AL691432.2-201ENST00000607222 2038 ntBASIC17.23■□□□□ 0.35
NICN1Q9BSH3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.23■□□□□ 0.35
NICN1Q9BSH3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms