Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 POU5F1P3-201ENST00000428824 1078 ntBASIC18.66■□□□□ 0.58
ZNF559Q9BR84 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 AC010536.3-201ENST00000620306 533 ntBASIC18.66■□□□□ 0.58
ZNF559Q9BR84 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF559Q9BR84 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 CNN2P6-201ENST00000439038 900 ntBASIC18.65■□□□□ 0.58
ZNF559Q9BR84 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 RNA5SP413-201ENST00000516373 109 ntBASIC18.65■□□□□ 0.58
ZNF559Q9BR84 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 AC008687.6-201ENST00000596318 630 ntBASIC18.65■□□□□ 0.58
ZNF559Q9BR84 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF559Q9BR84 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZNF559Q9BR84 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZNF559Q9BR84 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ZNF559Q9BR84 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 AC098934.4-201ENST00000564127 592 ntBASIC18.63■□□□□ 0.57
ZNF559Q9BR84 ITM2C-210ENST00000620962 501 ntBASIC18.63■□□□□ 0.57
ZNF559Q9BR84 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 KRT8P36-201ENST00000489121 1440 ntBASIC18.63■□□□□ 0.57
ZNF559Q9BR84 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ZNF559Q9BR84 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms