Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.95■□□□□ 0.62
PKP2Q99959 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.95■□□□□ 0.62
PKP2Q99959 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PKP2Q99959 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PKP2Q99959 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PKP2Q99959 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PKP2Q99959 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PKP2Q99959 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PKP2Q99959 AC061975.6-201ENST00000579045 1553 ntBASIC18.94■□□□□ 0.62
PKP2Q99959 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PKP2Q99959 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.94■□□□□ 0.62
PKP2Q99959 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PKP2Q99959 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PKP2Q99959 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PKP2Q99959 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PKP2Q99959 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.94■□□□□ 0.62
PKP2Q99959 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.94■□□□□ 0.62
PKP2Q99959 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.94■□□□□ 0.62
PKP2Q99959 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.94■□□□□ 0.62
PKP2Q99959 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.94■□□□□ 0.62
PKP2Q99959 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PKP2Q99959 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PKP2Q99959 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PKP2Q99959 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.94■□□□□ 0.62
PKP2Q99959 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PKP2Q99959 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.93■□□□□ 0.62
PKP2Q99959 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PKP2Q99959 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PKP2Q99959 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PKP2Q99959 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.93■□□□□ 0.62
PKP2Q99959 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PKP2Q99959 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.93■□□□□ 0.62
PKP2Q99959 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.93■□□□□ 0.62
PKP2Q99959 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PKP2Q99959 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PKP2Q99959 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.93■□□□□ 0.62
PKP2Q99959 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PKP2Q99959 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PKP2Q99959 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PKP2Q99959 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PKP2Q99959 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PKP2Q99959 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PKP2Q99959 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
PKP2Q99959 MIR3621-201ENST00000580529 85 ntBASIC18.93■□□□□ 0.62
PKP2Q99959 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.93■□□□□ 0.62
PKP2Q99959 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PKP2Q99959 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PKP2Q99959 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PKP2Q99959 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.93■□□□□ 0.62
PKP2Q99959 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PKP2Q99959 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
PKP2Q99959 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PKP2Q99959 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PKP2Q99959 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP2Q99959 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP2Q99959 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PKP2Q99959 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.92■□□□□ 0.62
PKP2Q99959 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP2Q99959 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PKP2Q99959 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PKP2Q99959 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
PKP2Q99959 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP2Q99959 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP2Q99959 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP2Q99959 SERBP1P1-201ENST00000396021 1160 ntBASIC18.92■□□□□ 0.62
PKP2Q99959 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.92■□□□□ 0.62
PKP2Q99959 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PKP2Q99959 SRD5A1P1-201ENST00000442297 786 ntBASIC18.92■□□□□ 0.62
PKP2Q99959 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.92■□□□□ 0.62
PKP2Q99959 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.92■□□□□ 0.62
PKP2Q99959 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.92■□□□□ 0.62
PKP2Q99959 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.92■□□□□ 0.62
PKP2Q99959 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP2Q99959 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.92■□□□□ 0.62
PKP2Q99959 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PKP2Q99959 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP2Q99959 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP2Q99959 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PKP2Q99959 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
PKP2Q99959 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP2Q99959 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.92■□□□□ 0.62
PKP2Q99959 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PKP2Q99959 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PKP2Q99959 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PKP2Q99959 AC120498.9-201ENST00000339021 3867 ntBASIC18.91■□□□□ 0.62
PKP2Q99959 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PKP2Q99959 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
PKP2Q99959 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PKP2Q99959 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PKP2Q99959 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PKP2Q99959 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PKP2Q99959 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
PKP2Q99959 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PKP2Q99959 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PKP2Q99959 AC008406.3-201ENST00000620001 1374 ntBASIC18.91■□□□□ 0.62
PKP2Q99959 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.91■□□□□ 0.62
PKP2Q99959 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PKP2Q99959 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PKP2Q99959 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms